Variant report
| Variant | rs4259895 |
|---|---|
| Chromosome Location | chr12:50901153-50901154 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:50898200-50902200 | Active TSS | Brain Angular Gyrus | brain |
| 2 | chr12:50898400-50901200 | Active TSS | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 3 | chr12:50898400-50901200 | Active TSS | Brain Dorsolateral Prefrontal Cortex | brain |
| 4 | chr12:50898400-50901200 | Active TSS | Psoas Muscle | Psoas |
| 5 | chr12:50898600-50901200 | Active TSS | Brain Cingulate Gyrus | brain |
| 6 | chr12:50899000-50901200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 7 | chr12:50899400-50901200 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 8 | chr12:50899400-50901200 | Flanking Active TSS | Primary hematopoietic stem cells | blood |
| 9 | chr12:50899400-50901200 | Flanking Active TSS | Dnd41 | blood |
| 10 | chr12:50899400-50901400 | Flanking Active TSS | Primary hematopoietic stem cells short term culture | blood |
| 11 | chr12:50899600-50901200 | Flanking Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
| 12 | chr12:50899600-50901200 | Flanking Active TSS | Primary T helper memory cells from peripheral blood 2 | blood |
| 13 | chr12:50899600-50901400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 14 | chr12:50899600-50901400 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 15 | chr12:50899600-50901400 | Weak transcription | Spleen | Spleen |
| 16 | chr12:50899600-50903400 | Flanking Active TSS | Primary T cells from cord blood | blood |
| 17 | chr12:50899600-50903400 | Flanking Active TSS | Primary T regulatory cells fromperipheralblood | blood |
| 18 | chr12:50899800-50901200 | Flanking Active TSS | Fetal Heart | heart |
| 19 | chr12:50899800-50901200 | Flanking Active TSS | Rectal Mucosa Donor 29 | rectum |
| 20 | chr12:50899800-50902600 | Weak transcription | Lung | lung |
| 21 | chr12:50899800-50903600 | Flanking Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 22 | chr12:50900000-50901200 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 23 | chr12:50900000-50901200 | Weak transcription | Pancreas | Pancrea |
| 24 | chr12:50900000-50901400 | Enhancers | Small Intestine | intestine |
| 25 | chr12:50900000-50901800 | Flanking Active TSS | Liver | Liver |
| 26 | chr12:50900000-50902600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 27 | chr12:50900000-50903000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 28 | chr12:50900000-50903400 | Flanking Active TSS | Brain Hippocampus Middle | brain |
| 29 | chr12:50900000-50903600 | Enhancers | Primary mononuclear cells fromperipheralblood | Blood |
| 30 | chr12:50900000-50911000 | Weak transcription | Colonic Mucosa | Colon |
| 31 | chr12:50900000-50911800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 32 | chr12:50900000-50925400 | Weak transcription | Esophagus | oesophagus |
| 33 | chr12:50900200-50901200 | Flanking Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 34 | chr12:50900200-50901200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 35 | chr12:50900200-50901200 | Enhancers | HSMM | muscle |
| 36 | chr12:50900200-50901200 | Enhancers | NHDF-Ad | bronchial |
| 37 | chr12:50900200-50901400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 38 | chr12:50900200-50901400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 39 | chr12:50900200-50901400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 40 | chr12:50900200-50901400 | Flanking Active TSS | Brain Germinal Matrix | brain |
| 41 | chr12:50900200-50901800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 42 | chr12:50900200-50902400 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 43 | chr12:50900200-50902600 | Enhancers | Fetal Brain Male | brain |
| 44 | chr12:50900200-50902800 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 45 | chr12:50900200-50903400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 46 | chr12:50900200-50903800 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 47 | chr12:50900200-50903800 | Enhancers | Stomach Mucosa | stomach |
| 48 | chr12:50900200-50904400 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 49 | chr12:50900200-50904400 | Weak transcription | Aorta | Aorta |
| 50 | chr12:50900200-50906800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
