The 2.0 version of rSNPBase
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Variant report
Variant
rs4265125
Chromosome Location
chr7:104301597-104301598
allele
C/T
Outlinks
Ensembl
 
UCSC
Chromatin state
Related regulatory elements
Target genes
Other information
TF binding region (count:0)
CpG islands (count:0)
Chromatin interactive region (count:1)
LncRNA region (count:0)
Mature miRNA region (count: 0)
miRNA target sites (count:0)
No data
No data
(count:1 , 50 per page) page:
1
No.
Distal block
Cell Line
Cell type
Cell Stage
1
chr7:104296839..104298758-chr7:104300188..104302569,2
K562
blood:
No data
No data
No data
No data
Extended variants information (count: 2 )
Associated traits (count: 4 )
rSNPs within LD-proxies of this variant (count:2)
rs_ID
r
2
[population]
rs4268058
1.00[CEU][hapmap]
rs4401767
1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap]
mRNA abundance (count:4)
SNP
Gene
Cis/trans
Tissue
Source
rs4265125
POP7
cis
cerebellum
SCAN
rs4265125
PUS7
cis
parietal
SCAN
rs4265125
ATXN7L1
cis
cerebellum
SCAN
rs4265125
LRWD1
cis
parietal
SCAN
Chromatin state (count:0 , 50 per page) page:
No data
Quick Search:
Input of quick search could be:
dbSNP/dbVar ID:
rs12345
/
nsv7879
a single nucleotide as 0-based coordinates:
chr1:12345
chromosomal regions:
chr1:12345-34567
what's new
New variant types
New dimension of annotation
New regulatory manner
More detailed annotation on variant overlapped TFBS
More extended data
New search manner
Quick links