Variant report
| Variant | rs4268058 |
|---|---|
| Chromosome Location | chr7:104297339-104297340 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr7:104296839..104298758-chr7:104300188..104302569,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:11)
| rs_ID | r2[population] |
|---|---|
| rs10241057 | 0.84[YRI][hapmap] |
| rs12537797 | 0.86[YRI][hapmap] |
| rs16869972 | 0.86[JPT][hapmap] |
| rs17139096 | 0.86[JPT][hapmap] |
| rs17139257 | 0.82[CHB][hapmap];0.86[JPT][hapmap] |
| rs2385239 | 0.86[JPT][hapmap] |
| rs4265125 | 1.00[CEU][hapmap] |
| rs4401767 | 1.00[CEU][hapmap] |
| rs4513902 | 0.85[YRI][hapmap] |
| rs6943307 | 0.84[YRI][hapmap] |
| rs7782065 | 0.84[YRI][hapmap] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1024532 | chr7:104281393-104299847 | Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
