Variant report

Variant	rs4279563
Chromosome Location	chr8:110165009-110165010
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs16879246	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16879257	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16879265	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16879274	0.81[AFR][1000 genomes]
rs4292664	0.81[AFR][1000 genomes]
rs6993107	0.81[AFR][1000 genomes]
rs6993565	0.81[AFR][1000 genomes]
rs7013591	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7013864	0.81[AFR][1000 genomes]
rs7814888	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7819524	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7827882	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7839384	0.88[AFR][1000 genomes]
rs7840499	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7841543	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110159200-110165200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr8:110165000-110165400	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr8:110165000-110165600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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