Variant report

No.	Distal block	Cell Line	Cell type
1	chr11:93385405..93388385-chr17:41464736..41467755,3	K562	blood:
2	chr11:93384857..93386804-chr11:93393751..93396000,2	MCF-7	breast:
3	chr11:93384737..93386704-chr11:93387448..93389310,2	K562	blood:
4	chr11:92967004..92969255-chr11:93384967..93385922,6	K562	blood:
5	chr11:93276243..93277171-chr11:93385273..93385858,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10741468	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10765630	1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10765632	1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10831087	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16919376	1.00[TSI][hapmap]
rs16919390	1.00[TSI][hapmap]
rs16919393	1.00[TSI][hapmap]
rs16919410	1.00[TSI][hapmap]
rs16919459	1.00[TSI][hapmap]
rs1939566	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2434983	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs4595504	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs584474	0.83[AMR][1000 genomes]
rs592526	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs604414	0.83[AMR][1000 genomes]
rs607826	1.00[MEX][hapmap];1.00[TSI][hapmap];0.83[AMR][1000 genomes]
rs624883	0.83[AMR][1000 genomes]
rs6483257	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6483263	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs655208	1.00[MEX][hapmap]
rs657177	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs666470	0.83[AMR][1000 genomes]
rs7103189	1.00[TSI][hapmap]
rs7109799	1.00[TSI][hapmap]
rs7119915	1.00[TSI][hapmap]
rs7120747	1.00[TSI][hapmap]
rs7123801	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7927030	0.86[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898181	chr11:93072843-93662459	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	119 gene(s)	inside rSNPs	diseases
2	nsv975401	chr11:93364502-93390549	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
3	nsv898182	chr11:93381845-93637462	Strong transcription Genic enhancers Active TSS Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:93379000-93387800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr11:93379000-93388800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr11:93385000-93386800	Enhancers	Monocytes-CD14+_RO01746	blood
4	chr11:93385200-93389600	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr11:93385400-93387000	Enhancers	GM12878-XiMat	blood
6	chr11:93385400-93388800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
7	chr11:93385600-93386400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
8	chr11:93385800-93386800	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr11:93385800-93388400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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