Variant report

Variant	rs4314946
Chromosome Location	chr1:211213286-211213287
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10494932	0.96[AFR][1000 genomes]
rs10863874	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11119662	0.84[ASN][1000 genomes]
rs11485203	0.80[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11583101	0.95[AFR][1000 genomes]
rs12750194	0.90[AFR][1000 genomes]
rs12756697	0.96[AFR][1000 genomes]
rs12760791	0.92[AFR][1000 genomes]
rs1393026	0.84[EUR][1000 genomes]
rs1393028	0.95[AFR][1000 genomes]
rs2358214	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35711968	0.97[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs59374111	0.93[AFR][1000 genomes]
rs6669457	0.83[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs6678283	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7517771	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7535286	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:211182800-211228600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr1:211210800-211228600	Weak transcription	Brain Hippocampus Middle	brain
3	chr1:211211200-211214800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr1:211211200-211214800	Weak transcription	HSMMtube	muscle
5	chr1:211211200-211215000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr1:211211200-211215000	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr1:211213200-211214200	Weak transcription	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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