Variant report

Variant	rs4317935
Chromosome Location	chr10:52633459-52633460
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs12570156	0.94[EUR][1000 genomes]
rs12769066	0.95[CEU][hapmap];0.82[CHB][hapmap];1.00[TSI][hapmap];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs16910313	0.96[CEU][hapmap];0.82[CHB][hapmap];0.80[AMR][1000 genomes];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4459236	0.95[CEU][hapmap];0.82[CHB][hapmap];0.93[EUR][1000 genomes];0.80[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:52580400-52643200	Weak transcription	Rectal Mucosa Donor 29	rectum
2	chr10:52617800-52634200	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr10:52619800-52639800	Weak transcription	Fetal Intestine Large	intestine
4	chr10:52622800-52643000	Weak transcription	Fetal Intestine Small	intestine
5	chr10:52628200-52634000	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr10:52629600-52642400	Weak transcription	Duodenum Mucosa	Duodenum
7	chr10:52631400-52646600	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr10:52632600-52640000	Weak transcription	Pancreas	Pancrea
9	chr10:52632800-52634400	Weak transcription	HepG2	liver
10	chr10:52632800-52636000	Enhancers	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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