Variant report

Variant	rs4354541
Chromosome Location	chr1:220656249-220656250
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs12025515	0.91[CHB][hapmap];0.86[JPT][hapmap]
rs12032166	0.90[CHB][hapmap];0.91[JPT][hapmap]
rs12048541	0.82[JPT][hapmap]
rs12123146	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12405059	1.00[CEU][hapmap];0.95[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12407585	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12407611	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12568419	1.00[CEU][hapmap];0.84[CHB][hapmap];0.96[JPT][hapmap];1.00[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12726257	1.00[CEU][hapmap];0.90[CHB][hapmap];0.95[JPT][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17007885	0.82[JPT][hapmap]
rs3849283	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220653800-220656600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr1:220654000-220656600	Weak transcription	Adipose Nuclei	Adipose

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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