Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10099741	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs10957227	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11988063	0.83[AFR][1000 genomes]
rs12155831	0.85[CEU][hapmap]
rs1351360	0.91[EUR][1000 genomes]
rs1351364	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1351366	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1383192	0.95[ASN][1000 genomes]
rs1383196	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1480186	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1531660	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1531661	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16929130	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1823666	0.91[EUR][1000 genomes]
rs1871592	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1993127	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1993128	0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1993129	0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2054531	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs2199842	0.92[ASN][1000 genomes]
rs2882924	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7826556	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018879	chr8:63281724-63937632	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv831340	chr8:63515126-63702660	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv890960	chr8:63516962-63629549	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63515000-63518000	Enhancers	Fetal Lung	lung
2	chr8:63516000-63519200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr8:63516800-63518600	Weak transcription	Fetal Kidney	kidney
4	chr8:63517000-63518400	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr8:63517000-63518600	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr8:63517000-63518600	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr8:63517000-63518600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr8:63517000-63518600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chr8:63517000-63521400	Weak transcription	Fetal Brain Female	brain
10	chr8:63517200-63518600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr8:63517200-63518800	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr8:63517400-63517600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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