The 2.0 version of rSNPBase

Variant report

Variant rs440595
Chromosome Location chr12:51403903-51403904
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51386000-51406600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr12:51386000-51414200 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr12:51388600-51406600 Weak transcription Small Intestine intestine
4 chr12:51389400-51405400 Weak transcription Esophagus oesophagus
5 chr12:51390000-51405800 Weak transcription Stomach Mucosa stomach
6 chr12:51399000-51406200 Weak transcription Colon Smooth Muscle Colon
7 chr12:51399200-51404400 Weak transcription NH-A brain
8 chr12:51399200-51418000 Weak transcription Gastric stomach
9 chr12:51399400-51408200 Weak transcription NHDF-Ad bronchial
10 chr12:51399600-51405800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr12:51399600-51405800 Weak transcription Spleen Spleen
12 chr12:51399800-51405200 Weak transcription HUVEC blood vessel
13 chr12:51399800-51406800 Weak transcription A549 lung
14 chr12:51399800-51414600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr12:51399800-51415600 Weak transcription Right Ventricle heart
16 chr12:51400000-51407200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr12:51400000-51407400 Weak transcription HMEC breast
18 chr12:51401000-51410800 Weak transcription HepG2 liver
19 chr12:51401400-51417800 Weak transcription Stomach Smooth Muscle stomach
20 chr12:51401600-51410000 Weak transcription Pancreas Pancrea
21 chr12:51402000-51405400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr12:51402000-51405400 Weak transcription Fetal Muscle Trunk muscle
23 chr12:51402000-51418000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr12:51402000-51418000 Weak transcription Fetal Stomach stomach
25 chr12:51402400-51405200 Enhancers Primary T helper cells fromperipheralblood blood
26 chr12:51402400-51405200 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr12:51402400-51405600 Weak transcription NHEK skin
28 chr12:51402400-51405800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr12:51402400-51406200 Weak transcription Fetal Lung lung
30 chr12:51402400-51406400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr12:51402400-51407200 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr12:51402400-51407200 Weak transcription Lung lung
33 chr12:51402400-51408600 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr12:51402400-51415600 Weak transcription GM12878-XiMat blood
35 chr12:51402400-51417200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr12:51402400-51417600 Weak transcription Left Ventricle heart
37 chr12:51402400-51418000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr12:51402600-51404000 Enhancers Primary T cells fromperipheralblood blood
39 chr12:51402600-51404600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
40 chr12:51402600-51405800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr12:51402600-51406400 Enhancers Fetal Brain Male brain
42 chr12:51402600-51406800 Enhancers Cortex derived primary cultured neurospheres brain
43 chr12:51402800-51404800 Enhancers Fetal Brain Female brain
44 chr12:51403000-51404000 Enhancers Primary monocytes fromperipheralblood blood
45 chr12:51403000-51404200 Enhancers Fetal Thymus thymus
46 chr12:51403000-51405800 Weak transcription Psoas Muscle Psoas
47 chr12:51403000-51406600 Weak transcription Fetal Muscle Leg muscle
48 chr12:51403000-51406600 Weak transcription Placenta Placenta
49 chr12:51403000-51418000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr12:51403200-51404800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015