Variant report
Variant | rs4412357 |
---|---|
Chromosome Location | chr8:58277301-58277302 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:2)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
(count:2 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-FAM110B-5 | chr8:58277101-58277416 | ENSG00000253871 |
2 | lnc-FAM110B-5 | chr8:58277101-58277387 | NONHSAT126752 |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs13248932 | 0.84[ASN][1000 genomes] |
rs13256707 | 0.81[ASN][1000 genomes] |
rs13262104 | 0.96[ASN][1000 genomes] |
rs13266601 | 0.96[ASN][1000 genomes] |
rs13282450 | 0.86[ASN][1000 genomes] |
rs34042655 | 0.86[ASN][1000 genomes] |
rs35554965 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs36058830 | 0.96[ASN][1000 genomes] |
rs62514773 | 0.96[ASN][1000 genomes] |
rs62514774 | 0.86[ASN][1000 genomes] |
rs62514775 | 0.86[ASN][1000 genomes] |
rs6983405 | 0.96[ASN][1000 genomes] |
rs954295 | 0.80[EUR][1000 genomes];0.84[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv2758161 | chr8:57930392-58474449 | Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 12 gene(s) | inside rSNPs | diseases |
2 | esv2759618 | chr8:57930392-58474449 | Enhancers ZNF genes & repeats Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 12 gene(s) | inside rSNPs | diseases |
3 | nsv533217 | chr8:57991065-58789001 | Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 16 gene(s) | inside rSNPs | diseases |
4 | nsv890936 | chr8:58266339-58564501 | Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
No data |