The 2.0 version of rSNPBase

Variant report

Variant rs4434961
Chromosome Location chr11:47634720-47634721
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:47617600-47643200 Weak transcription Rectal Smooth Muscle rectum
2 chr11:47618000-47639200 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr11:47620800-47637800 Weak transcription Placenta Amnion Placenta Amnion
4 chr11:47621000-47640400 Weak transcription Fetal Brain Female brain
5 chr11:47621600-47638200 Weak transcription Hela-S3 cervix
6 chr11:47621600-47647600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr11:47621800-47642000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr11:47622000-47636000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr11:47622000-47637600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr11:47625200-47637800 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr11:47626000-47638400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr11:47626200-47638400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr11:47626400-47639200 Weak transcription Colonic Mucosa Colon
14 chr11:47626600-47635000 Weak transcription A549 lung
15 chr11:47626600-47639000 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr11:47627800-47643200 Weak transcription Pancreas Pancrea
17 chr11:47628600-47638400 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr11:47628600-47638600 Weak transcription H1 Cell Line embryonic stem cell
19 chr11:47628800-47642000 Weak transcription Brain Inferior Temporal Lobe brain
20 chr11:47629200-47638000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr11:47629400-47638400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr11:47629400-47639600 Weak transcription HMEC breast
23 chr11:47629800-47634800 Weak transcription Brain Anterior Caudate brain
24 chr11:47629800-47636600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr11:47629800-47637800 Weak transcription Primary T cells fromperipheralblood blood
26 chr11:47629800-47638600 Weak transcription Brain Angular Gyrus brain
27 chr11:47629800-47640800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr11:47629800-47642400 Weak transcription Colon Smooth Muscle Colon
29 chr11:47630000-47634800 Weak transcription Brain Hippocampus Middle brain
30 chr11:47630000-47634800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr11:47630000-47638400 Weak transcription Thymus Thymus
32 chr11:47630000-47638400 Weak transcription Osteobl bone
33 chr11:47630000-47639000 Weak transcription NHLF lung
34 chr11:47630000-47639800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr11:47630000-47641200 Weak transcription Small Intestine intestine
36 chr11:47630000-47642200 Weak transcription Fetal Brain Male brain
37 chr11:47630200-47638400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr11:47630200-47638600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr11:47630200-47638600 Weak transcription NH-A brain
40 chr11:47630200-47639200 Weak transcription Placenta Placenta
41 chr11:47630200-47639600 Weak transcription Fetal Muscle Trunk muscle
42 chr11:47630200-47640200 Weak transcription HSMM muscle
43 chr11:47630400-47638000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr11:47630400-47638800 Weak transcription Muscle Satellite Cultured Cells --
45 chr11:47630400-47648600 Weak transcription ES-I3 Cell Line embryonic stem cell
46 chr11:47630400-47649600 Weak transcription Fetal Heart heart
47 chr11:47631000-47639200 Strong transcription Fetal Intestine Small intestine
48 chr11:47631200-47638400 Weak transcription Duodenum Mucosa Duodenum
49 chr11:47631200-47639000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr11:47631200-47642400 Weak transcription Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015