The 2.0 version of rSNPBase

Variant report

Variant rs4444142
Chromosome Location chr12:51362522-51362523
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51323000-51377200 Weak transcription Aorta Aorta
2 chr12:51328800-51378000 Weak transcription Brain Substantia Nigra brain
3 chr12:51329600-51373600 Weak transcription Left Ventricle heart
4 chr12:51331400-51378400 Weak transcription Placenta Amnion Placenta Amnion
5 chr12:51331600-51373800 Weak transcription Pancreas Pancrea
6 chr12:51331800-51382000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr12:51331800-51382000 Weak transcription Ovary ovary
8 chr12:51332600-51365000 Weak transcription Fetal Brain Female brain
9 chr12:51341600-51378200 Weak transcription Right Ventricle heart
10 chr12:51341800-51372600 Weak transcription Osteobl bone
11 chr12:51341800-51383200 Weak transcription Fetal Brain Male brain
12 chr12:51342400-51373200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr12:51342800-51378400 Weak transcription NHLF lung
14 chr12:51343000-51366200 Weak transcription Brain Germinal Matrix brain
15 chr12:51343600-51366200 Weak transcription Gastric stomach
16 chr12:51344000-51382000 Weak transcription Esophagus oesophagus
17 chr12:51344600-51381600 Weak transcription Spleen Spleen
18 chr12:51347200-51378000 Weak transcription Brain Angular Gyrus brain
19 chr12:51347400-51378000 Weak transcription Brain Anterior Caudate brain
20 chr12:51349200-51363600 Weak transcription Primary hematopoietic stem cells blood
21 chr12:51350800-51380600 Weak transcription Fetal Lung lung
22 chr12:51351200-51365200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr12:51354200-51363000 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr12:51354200-51365200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr12:51354400-51365200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr12:51354400-51365200 Weak transcription Dnd41 blood
27 chr12:51354400-51383800 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr12:51354600-51364200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr12:51355200-51365200 Weak transcription HSMM muscle
30 chr12:51355600-51378000 Weak transcription Muscle Satellite Cultured Cells --
31 chr12:51355800-51366200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr12:51355800-51378000 Weak transcription A549 lung
33 chr12:51356000-51365200 Weak transcription Skeletal Muscle Male skeletal muscle
34 chr12:51356000-51372600 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr12:51357600-51378000 Weak transcription Psoas Muscle Psoas
36 chr12:51358200-51366200 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr12:51358400-51365200 Weak transcription Brain Cingulate Gyrus brain
38 chr12:51358800-51364400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr12:51358800-51377800 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr12:51359600-51365200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr12:51359800-51380400 Weak transcription Fetal Kidney kidney
42 chr12:51360000-51364200 Strong transcription Primary T cells from cord blood blood
43 chr12:51360000-51366400 Strong transcription Fetal Thymus thymus
44 chr12:51360200-51363800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr12:51360200-51365600 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr12:51360200-51374400 Weak transcription Primary T cells fromperipheralblood blood
47 chr12:51360200-51381800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr12:51360400-51363600 Weak transcription Duodenum Mucosa Duodenum
49 chr12:51360400-51365200 Weak transcription Liver Liver
50 chr12:51360400-51365800 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015