Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10864165	0.93[AFR][1000 genomes];0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10864166	0.96[ASN][1000 genomes]
rs11120524	0.96[AFR][1000 genomes];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11120530	0.85[ASN][1000 genomes]
rs11120533	0.81[ASN][1000 genomes]
rs11583745	0.83[EUR][1000 genomes]
rs11588455	0.85[ASN][1000 genomes]
rs12026702	0.84[ASN][1000 genomes]
rs12036046	0.94[ASN][1000 genomes]
rs12037855	0.81[ASN][1000 genomes]
rs12047082	0.85[ASN][1000 genomes]
rs12750276	0.85[ASN][1000 genomes]
rs12752882	0.85[ASN][1000 genomes]
rs1416661	0.81[ASN][1000 genomes]
rs1538544	0.81[ASN][1000 genomes]
rs2153244	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6540886	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6540887	0.96[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6670661	0.96[AFR][1000 genomes];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7522160	0.92[ASN][1000 genomes]
rs946487	0.85[ASN][1000 genomes]
rs946489	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873169	chr1:215264486-215453286	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases
2	nsv873170	chr1:215367248-215440975	Weak transcription Genic enhancers Enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215380600-215408000	Weak transcription	Osteobl	bone
2	chr1:215388600-215408200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr1:215389200-215401400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr1:215392000-215408000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr1:215394000-215407800	Weak transcription	NHDF-Ad	bronchial

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