The 2.0 version of rSNPBase

Variant report

Variant rs4472899
Chromosome Location chr11:46708602-46708603
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46667200-46717000 Strong transcription Brain Germinal Matrix brain
2 chr11:46691600-46709200 Weak transcription HUVEC blood vessel
3 chr11:46697200-46716000 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr11:46697200-46721200 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr11:46697800-46709200 Strong transcription Fetal Stomach stomach
6 chr11:46698000-46708800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr11:46698000-46708800 Strong transcription Stomach Smooth Muscle stomach
8 chr11:46698000-46718600 Strong transcription Rectal Mucosa Donor 29 rectum
9 chr11:46698400-46709000 Weak transcription Fetal Kidney kidney
10 chr11:46698400-46719400 Strong transcription Sigmoid Colon Sigmoid Colon
11 chr11:46699200-46715800 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr11:46699200-46716400 Strong transcription Primary T helper cells PMA-I stimulated --
13 chr11:46699200-46717000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
14 chr11:46699200-46717200 Strong transcription Liver Liver
15 chr11:46699200-46719000 Strong transcription Primary B cells from peripheral blood blood
16 chr11:46699800-46715200 Strong transcription Fetal Muscle Leg muscle
17 chr11:46700400-46714000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr11:46700400-46718800 Strong transcription Primary neutrophils fromperipheralblood blood
19 chr11:46700600-46715400 Strong transcription Primary T cells fromperipheralblood blood
20 chr11:46701000-46709000 Weak transcription GM12878-XiMat blood
21 chr11:46701400-46710600 Strong transcription Fetal Intestine Small intestine
22 chr11:46701800-46709000 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr11:46701800-46715400 Weak transcription K562 blood
24 chr11:46701800-46718600 Strong transcription Fetal Intestine Large intestine
25 chr11:46702000-46715800 Weak transcription H9 Cell Line embryonic stem cell
26 chr11:46702600-46708800 Weak transcription NH-A brain
27 chr11:46702600-46721400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr11:46702800-46716000 Weak transcription H1 Cell Line embryonic stem cell
29 chr11:46702800-46716600 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr11:46702800-46718400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr11:46703000-46715000 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr11:46703000-46715200 Weak transcription Hela-S3 cervix
33 chr11:46703000-46721400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr11:46703400-46716400 Weak transcription Pancreatic Islets Pancreatic Islet
35 chr11:46703600-46713400 Weak transcription Ovary ovary
36 chr11:46703800-46714000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr11:46704400-46716800 Weak transcription Small Intestine intestine
38 chr11:46704800-46710200 Genic enhancers Brain Hippocampus Middle brain
39 chr11:46705200-46709200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr11:46705600-46709400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr11:46705600-46710000 Strong transcription HepG2 liver
42 chr11:46706200-46709200 Weak transcription Fetal Brain Male brain
43 chr11:46706600-46718000 Strong transcription Cortex derived primary cultured neurospheres brain
44 chr11:46707000-46708800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr11:46707000-46719000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr11:46707200-46709000 Strong transcription Fetal Muscle Trunk muscle
47 chr11:46707200-46709800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr11:46707200-46716000 Strong transcription Fetal Adrenal Gland Adrenal Gland
49 chr11:46707200-46716600 Strong transcription Primary T helper naive cells fromperipheralblood blood
50 chr11:46707200-46719000 Strong transcription Primary monocytes fromperipheralblood blood

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Last update: Aug 31, 2015