Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10244859	0.81[CHB][hapmap];0.81[JPT][hapmap]
rs10279337	0.85[CHB][hapmap]
rs10280745	0.84[CHB][hapmap]
rs10464615	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs12531723	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs12534285	0.80[ASN][1000 genomes]
rs12535033	0.80[ASN][1000 genomes]
rs12536801	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs12705261	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs12705263	0.84[CHB][hapmap];0.81[JPT][hapmap]
rs12705264	0.81[CHB][hapmap];0.83[JPT][hapmap]
rs13241253	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs13242612	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs3934669	0.86[CEU][hapmap]
rs4255068	0.82[JPT][hapmap];0.80[ASN][1000 genomes]
rs4419737	0.85[CHB][hapmap];0.86[JPT][hapmap]
rs4512324	0.81[CHB][hapmap]
rs4517051	0.85[CHB][hapmap];0.91[JPT][hapmap]
rs4559180	0.91[CEU][hapmap]
rs4566971	0.83[JPT][hapmap]
rs4624947	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs4730037	0.82[JPT][hapmap]
rs6945225	0.81[CHB][hapmap]
rs6955455	0.90[CHB][hapmap];0.85[JPT][hapmap]
rs6962309	0.84[CHB][hapmap];0.84[JPT][hapmap]
rs73415632	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73415633	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7777352	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7782285	0.80[ASN][1000 genomes]
rs7801294	0.80[ASN][1000 genomes]
rs9885990	0.82[JPT][hapmap]
rs9886292	0.81[CHB][hapmap];0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429790	chr7:104314049-104488049	Enhancers Weak transcription Genic enhancers Flanking Active TSS Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:104338400-104342800	Weak transcription	Colon Smooth Muscle	Colon
2	chr7:104341800-104343800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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