The 2.0 version of rSNPBase

Variant report

Variant rs4513526
Chromosome Location chr4:87519509-87519510
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:87516000-87520000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr4:87517000-87536600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr4:87517200-87529800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr4:87517400-87520800 Weak transcription Fetal Intestine Small intestine
5 chr4:87517600-87521600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr4:87517800-87519600 Enhancers Fetal Lung lung
7 chr4:87518000-87519600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
8 chr4:87518000-87521000 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr4:87518600-87520200 Enhancers Brain Hippocampus Middle brain
10 chr4:87518600-87526000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr4:87518800-87519600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
12 chr4:87518800-87520800 Weak transcription Fetal Intestine Large intestine
13 chr4:87518800-87521000 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr4:87518800-87522000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
15 chr4:87519000-87519600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr4:87519000-87519600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr4:87519000-87520000 Enhancers iPS-20b Cell Line embryonic stem cell
18 chr4:87519000-87521000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr4:87519000-87521000 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr4:87519000-87521000 Weak transcription Brain Anterior Caudate brain
21 chr4:87519000-87521000 Weak transcription A549 lung
22 chr4:87519000-87521200 Weak transcription Fetal Kidney kidney
23 chr4:87519000-87523000 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr4:87519000-87523000 Weak transcription Brain Inferior Temporal Lobe brain
25 chr4:87519000-87524000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr4:87519000-87524200 Enhancers Primary T helper 17 cells PMA-I stimulated --
27 chr4:87519000-87525600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr4:87519000-87526000 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr4:87519000-87529200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr4:87519000-87530000 Weak transcription Osteobl bone
31 chr4:87519200-87520000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr4:87519200-87520000 Enhancers Brain Cingulate Gyrus brain
33 chr4:87519200-87520200 Enhancers Ovary ovary
34 chr4:87519200-87520800 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr4:87519200-87521000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr4:87519200-87521200 Weak transcription NHDF-Ad bronchial
37 chr4:87519200-87521600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr4:87519200-87522800 Weak transcription Brain Substantia Nigra brain
39 chr4:87519200-87523000 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr4:87519200-87523000 Weak transcription HMEC breast
41 chr4:87519200-87525600 Enhancers NHEK skin
42 chr4:87519400-87520200 Enhancers Esophagus oesophagus
43 chr4:87519400-87529600 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015