Variant report

Variant	rs4518485
Chromosome Location	chr6:54979492-54979493
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs12175211	1.00[CHB][hapmap]
rs13211183	1.00[GIH][hapmap]
rs35576476	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4594937	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62416376	0.89[ASN][1000 genomes]
rs62416415	0.95[ASN][1000 genomes]
rs62416457	0.95[ASN][1000 genomes]
rs6937662	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71560884	0.81[EUR][1000 genomes]
rs9349746	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9357827	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9357830	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9357833	0.84[ASN][1000 genomes]
rs9357834	0.84[ASN][1000 genomes]
rs9367613	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs9370339	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs9370340	1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[JPT][hapmap]
rs9370349	0.81[EUR][1000 genomes]
rs9370365	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9370372	0.84[ASN][1000 genomes]
rs9370376	0.89[ASN][1000 genomes]
rs9370383	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9382401	1.00[CHB][hapmap];0.85[JPT][hapmap]
rs9382423	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9382424	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9382425	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9382433	0.84[ASN][1000 genomes]
rs9382435	0.84[ASN][1000 genomes]
rs9382439	0.89[ASN][1000 genomes]
rs9382451	0.95[ASN][1000 genomes]
rs9382453	0.86[ASN][1000 genomes]
rs9396029	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9396030	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9396031	0.84[ASN][1000 genomes]
rs9396037	1.00[CHB][hapmap]
rs9396048	0.95[ASN][1000 genomes]
rs9396049	0.95[ASN][1000 genomes]
rs9637955	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033543	chr6:54978528-55000338	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:54979200-54980400	Enhancers	Duodenum Mucosa	Duodenum

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