The 2.0 version of rSNPBase

Variant report

Variant rs4519775
Chromosome Location chr4:173920007-173920008
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:173904200-173935200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr4:173910400-173920200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr4:173914800-173920200 Weak transcription Esophagus oesophagus
4 chr4:173915800-173920600 Enhancers HSMMtube muscle
5 chr4:173916200-173920600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr4:173916400-173920600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr4:173916400-173920800 Enhancers HMEC breast
8 chr4:173917000-173920600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr4:173917200-173920600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr4:173917600-173920600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
11 chr4:173917600-173920800 Enhancers NH-A brain
12 chr4:173917800-173920600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr4:173917800-173920800 Enhancers Hela-S3 cervix
14 chr4:173917800-173920800 Enhancers NHDF-Ad bronchial
15 chr4:173918400-173920400 Enhancers Primary monocytes fromperipheralblood blood
16 chr4:173918600-173920400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr4:173918800-173920400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
18 chr4:173919000-173920600 Enhancers Rectal Mucosa Donor 31 rectum
19 chr4:173919000-173920600 Enhancers NHLF lung
20 chr4:173919200-173920200 Weak transcription A549 lung
21 chr4:173919400-173920400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr4:173919600-173920200 Enhancers iPS-18 Cell Line embryonic stem cell
23 chr4:173919600-173920200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr4:173919600-173920400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr4:173919600-173920400 Enhancers HUES64 Cell Line embryonic stem cell
26 chr4:173919600-173920400 Flanking Active TSS Osteobl bone
27 chr4:173919600-173920600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr4:173919600-173920600 Enhancers Fetal Intestine Large intestine
29 chr4:173919600-173920800 Flanking Active TSS K562 blood
30 chr4:173919800-173920200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr4:173919800-173920200 Enhancers Stomach Mucosa stomach
32 chr4:173919800-173920400 Enhancers Cortex derived primary cultured neurospheres brain
33 chr4:173919800-173920400 Enhancers Fetal Intestine Small intestine
34 chr4:173919800-173920400 Enhancers Fetal Muscle Leg muscle
35 chr4:173920000-173920200 Enhancers Muscle Satellite Cultured Cells --
36 chr4:173920000-173920200 Enhancers HSMM muscle
37 chr4:173920000-173920600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr4:173920000-173920600 Enhancers Psoas Muscle Psoas
39 chr4:173920000-173920600 Enhancers Skeletal Muscle Male skeletal muscle
40 chr4:173920000-173920600 Enhancers Skeletal Muscle Female skeletal muscle
41 chr4:173920000-173920800 Enhancers NHEK skin
42 chr4:173920000-173922800 Weak transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015