Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:58630632..58632291-chr8:58633051..58635179,2	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10957018	0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4131858	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4301443	0.88[ASW][hapmap];0.83[CHB][hapmap];0.86[CHD][hapmap];0.94[JPT][hapmap];0.81[YRI][hapmap];0.82[ASN][1000 genomes]
rs4374979	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4380930	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4549756	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4559230	0.88[CHB][hapmap];0.94[JPT][hapmap];0.84[YRI][hapmap];0.81[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs4560771	0.83[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs4593530	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4598240	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4639502	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4738608	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4738615	0.82[CHB][hapmap];0.84[JPT][hapmap];0.91[YRI][hapmap];0.81[AFR][1000 genomes];0.80[ASN][1000 genomes]
rs4738616	0.83[CHB][hapmap];0.94[JPT][hapmap];0.81[YRI][hapmap];0.80[ASN][1000 genomes]
rs4738617	0.89[CHB][hapmap];0.88[JPT][hapmap];0.88[YRI][hapmap];0.81[AFR][1000 genomes]
rs6471641	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7000187	0.88[ASN][1000 genomes]
rs7000215	0.88[ASN][1000 genomes]
rs7000222	0.88[ASN][1000 genomes]
rs7005279	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533217	chr8:57991065-58789001	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv890937	chr8:58600994-58695807	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs4532583	TMEM68	cis	cerebellum	SCAN
rs4532583	RAB2A	cis	cerebellum	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:58632800-58633400	Enhancers	Stomach Mucosa	stomach

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