The 2.0 version of rSNPBase

Variant report

Variant rs454520
Chromosome Location chr12:51410745-51410746
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51386000-51414200 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr12:51399200-51418000 Weak transcription Gastric stomach
3 chr12:51399800-51414600 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr12:51399800-51415600 Weak transcription Right Ventricle heart
5 chr12:51401000-51410800 Weak transcription HepG2 liver
6 chr12:51401400-51417800 Weak transcription Stomach Smooth Muscle stomach
7 chr12:51402000-51418000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr12:51402000-51418000 Weak transcription Fetal Stomach stomach
9 chr12:51402400-51415600 Weak transcription GM12878-XiMat blood
10 chr12:51402400-51417200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr12:51402400-51417600 Weak transcription Left Ventricle heart
12 chr12:51402400-51418000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr12:51403000-51418000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr12:51403400-51415600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr12:51403400-51417600 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr12:51403600-51412000 Weak transcription Fetal Intestine Small intestine
17 chr12:51403600-51414200 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr12:51403600-51414400 Weak transcription Hela-S3 cervix
19 chr12:51403600-51414600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr12:51403600-51417400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr12:51403600-51417600 Weak transcription HSMM muscle
22 chr12:51403800-51411200 Weak transcription Fetal Intestine Large intestine
23 chr12:51403800-51412800 Weak transcription Primary T cells from cord blood blood
24 chr12:51403800-51412800 Weak transcription Dnd41 blood
25 chr12:51403800-51417000 Weak transcription Brain Germinal Matrix brain
26 chr12:51404000-51411400 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr12:51404200-51411200 Weak transcription Fetal Thymus thymus
28 chr12:51404200-51411200 Weak transcription Ovary ovary
29 chr12:51404200-51411200 Weak transcription Thymus Thymus
30 chr12:51404200-51414600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr12:51404800-51417800 Weak transcription Fetal Brain Female brain
32 chr12:51405800-51415000 Weak transcription Fetal Muscle Trunk muscle
33 chr12:51406000-51414600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr12:51406000-51415200 Weak transcription Right Atrium heart
35 chr12:51406400-51417200 Weak transcription Fetal Brain Male brain
36 chr12:51406400-51417400 Weak transcription Osteobl bone
37 chr12:51406400-51417600 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr12:51406600-51413800 Weak transcription Brain Anterior Caudate brain
39 chr12:51406800-51414200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr12:51406800-51415000 Weak transcription Fetal Heart heart
41 chr12:51407000-51412800 Weak transcription Brain Cingulate Gyrus brain
42 chr12:51407000-51412800 Weak transcription Brain Inferior Temporal Lobe brain
43 chr12:51407000-51414800 Weak transcription iPS-15b Cell Line embryonic stem cell
44 chr12:51407000-51417400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr12:51407000-51417600 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr12:51407000-51418000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr12:51407200-51415800 Weak transcription Duodenum Mucosa Duodenum
48 chr12:51407400-51411000 Weak transcription Brain Hippocampus Middle brain
49 chr12:51407400-51411200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr12:51407400-51412800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015