The 2.0 version of rSNPBase

Variant report

Variant rs45452391
Chromosome Location chr1:220789525-220789526
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220749800-220799000 Weak transcription Aorta Aorta
2 chr1:220751800-220799000 Weak transcription Fetal Stomach stomach
3 chr1:220752600-220808600 Weak transcription Left Ventricle heart
4 chr1:220756000-220790800 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr1:220761200-220799200 Weak transcription H1 Cell Line embryonic stem cell
6 chr1:220764200-220790200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr1:220767400-220798600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:220767600-220799000 Weak transcription Fetal Muscle Trunk muscle
9 chr1:220767800-220826400 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr1:220768000-220790800 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr1:220768000-220804600 Weak transcription iPS-20b Cell Line embryonic stem cell
12 chr1:220768000-220813800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:220768200-220791600 Weak transcription Brain Germinal Matrix brain
14 chr1:220768400-220799000 Weak transcription Adipose Nuclei Adipose
15 chr1:220774000-220796000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr1:220776000-220798800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:220776400-220789800 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr1:220776400-220790400 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr1:220777200-220793200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr1:220778000-220793600 Weak transcription Colon Smooth Muscle Colon
21 chr1:220778800-220791000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:220778800-220837200 Weak transcription NHEK skin
23 chr1:220781000-220791600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:220782800-220825800 Weak transcription Fetal Brain Male brain
25 chr1:220783200-220815000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:220783400-220791800 Weak transcription Stomach Smooth Muscle stomach
27 chr1:220784200-220836600 Weak transcription Fetal Lung lung
28 chr1:220784800-220799200 Weak transcription Fetal Muscle Leg muscle
29 chr1:220784800-220815000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr1:220785000-220789600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr1:220785000-220791800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:220785000-220799200 Weak transcription Fetal Brain Female brain
33 chr1:220785000-220815400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr1:220785800-220808600 Weak transcription Brain Anterior Caudate brain
35 chr1:220786800-220799800 Weak transcription Fetal Heart heart
36 chr1:220787800-220789600 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr1:220788800-220799000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015