Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10082439	0.95[ASN][1000 genomes]
rs10218998	0.95[ASN][1000 genomes]
rs1029179	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10741094	0.89[ASN][1000 genomes]
rs10764558	0.86[ASN][1000 genomes]
rs10828818	0.95[ASN][1000 genomes]
rs11014610	0.86[ASN][1000 genomes]
rs1335199	0.95[ASN][1000 genomes]
rs1335200	0.93[ASN][1000 genomes]
rs1414041	0.91[ASN][1000 genomes]
rs1414042	0.91[ASN][1000 genomes]
rs1414043	0.91[ASN][1000 genomes]
rs1414052	0.92[ASN][1000 genomes]
rs1556665	0.89[ASN][1000 genomes]
rs1855671	0.91[ASN][1000 genomes]
rs1981117	0.94[ASN][1000 genomes]
rs4747530	0.95[ASN][1000 genomes]
rs4749046	0.89[ASN][1000 genomes]
rs4749047	0.87[ASN][1000 genomes]
rs6482493	0.92[ASN][1000 genomes]
rs6482494	0.86[ASN][1000 genomes]
rs7090998	0.85[ASN][1000 genomes]
rs7091908	0.88[ASN][1000 genomes]
rs7100629	0.98[ASN][1000 genomes]
rs7903204	0.92[ASN][1000 genomes]
rs7903336	0.92[ASN][1000 genomes]
rs7913399	0.92[ASN][1000 genomes]
rs7919640	0.98[ASN][1000 genomes]
rs7922752	0.86[ASN][1000 genomes]
rs9919420	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3349863	chr10:25614571-25946379	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25820000-25836800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr10:25826000-25834600	Weak transcription	Cortex derived primary cultured neurospheres	brain

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