The 2.0 version of rSNPBase

Variant report

Variant rs45605832
Chromosome Location chr19:36515406-36515407
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:36505600-36521000 Weak transcription Fetal Brain Male brain
2 chr19:36505800-36522000 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr19:36505800-36522200 Weak transcription Fetal Kidney kidney
4 chr19:36505800-36522800 Weak transcription Small Intestine intestine
5 chr19:36506000-36522400 Weak transcription NH-A brain
6 chr19:36506000-36522800 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr19:36506000-36523000 Weak transcription HSMM muscle
8 chr19:36506000-36523200 Weak transcription Left Ventricle heart
9 chr19:36506000-36523600 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr19:36506200-36517600 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr19:36506200-36519400 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr19:36506200-36519400 Strong transcription Fetal Brain Female brain
13 chr19:36506200-36522400 Strong transcription Fetal Stomach stomach
14 chr19:36506200-36522800 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr19:36506200-36523000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr19:36506200-36523200 Weak transcription HUVEC blood vessel
17 chr19:36506200-36523400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr19:36506200-36523400 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr19:36506400-36518800 Strong transcription Osteobl bone
20 chr19:36506400-36519600 Strong transcription Fetal Muscle Leg muscle
21 chr19:36506400-36519800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr19:36506400-36519800 Strong transcription Stomach Smooth Muscle stomach
23 chr19:36506400-36520400 Strong transcription Brain Germinal Matrix brain
24 chr19:36506400-36521600 Strong transcription Cortex derived primary cultured neurospheres brain
25 chr19:36506400-36521800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr19:36506400-36523000 Weak transcription Primary hematopoietic stem cells blood
27 chr19:36506400-36544400 Weak transcription GM12878-XiMat blood
28 chr19:36506600-36518800 Strong transcription Duodenum Smooth Muscle Duodenum
29 chr19:36506600-36519000 Strong transcription Breast Myoepithelial Primary Cells Breast
30 chr19:36506600-36519600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr19:36506800-36519800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr19:36506800-36532400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr19:36507000-36516600 Weak transcription HepG2 liver
34 chr19:36507000-36532200 Weak transcription Hela-S3 cervix
35 chr19:36507600-36518600 Strong transcription Primary hematopoietic stem cells short term culture blood
36 chr19:36507600-36519200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
37 chr19:36507600-36521800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr19:36507800-36518800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr19:36507800-36519800 Strong transcription Fetal Intestine Small intestine
40 chr19:36508800-36516600 Weak transcription Rectal Smooth Muscle rectum
41 chr19:36508800-36519800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr19:36508800-36532400 Weak transcription NHEK skin
43 chr19:36510200-36518800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr19:36510400-36516800 Weak transcription HSMMtube muscle
45 chr19:36510400-36517000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr19:36510600-36515800 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr19:36511000-36515800 Strong transcription HUES64 Cell Line embryonic stem cell
48 chr19:36511400-36518200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr19:36511400-36518400 Strong transcription Dnd41 blood
50 chr19:36511400-36518600 Strong transcription Fetal Lung lung

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Last update: Aug 31, 2015