The 2.0 version of rSNPBase

Variant report

Variant rs4576779
Chromosome Location chr11:47121547-47121548
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:47094000-47125200 Weak transcription Fetal Muscle Leg muscle
2 chr11:47110000-47126000 Weak transcription Brain Angular Gyrus brain
3 chr11:47115400-47122000 Weak transcription Pancreas Pancrea
4 chr11:47117400-47125800 Weak transcription Fetal Intestine Small intestine
5 chr11:47118800-47123000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr11:47120000-47121800 Enhancers HepG2 liver
7 chr11:47120000-47122200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr11:47120000-47122200 Enhancers Brain Hippocampus Middle brain
9 chr11:47120400-47121600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
10 chr11:47120400-47121600 Enhancers Fetal Lung lung
11 chr11:47120400-47123200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr11:47120600-47122000 Enhancers Rectal Mucosa Donor 31 rectum
13 chr11:47120800-47121600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr11:47120800-47121600 Enhancers Sigmoid Colon Sigmoid Colon
15 chr11:47120800-47121600 Enhancers HUVEC blood vessel
16 chr11:47120800-47121600 Enhancers Osteobl bone
17 chr11:47120800-47121800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr11:47120800-47122200 Enhancers Rectal Mucosa Donor 29 rectum
19 chr11:47121000-47121600 Enhancers Muscle Satellite Cultured Cells --
20 chr11:47121000-47121600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
21 chr11:47121000-47121600 Enhancers NH-A brain
22 chr11:47121000-47122000 Weak transcription Gastric stomach
23 chr11:47121000-47122000 Enhancers HSMMtube muscle
24 chr11:47121200-47121600 Enhancers Liver Liver
25 chr11:47121200-47121600 Enhancers Brain Anterior Caudate brain
26 chr11:47121200-47121600 Enhancers HSMM muscle
27 chr11:47121200-47121800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr11:47121200-47122000 Enhancers Brain Inferior Temporal Lobe brain
29 chr11:47121200-47123000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr11:47121200-47130600 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr11:47121200-47132600 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr11:47121400-47121600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr11:47121400-47121600 Enhancers Brain Cingulate Gyrus brain
34 chr11:47121400-47121800 Weak transcription Stomach Mucosa stomach
35 chr11:47121400-47123000 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr11:47121400-47125600 Weak transcription NHLF lung
37 chr11:47121400-47125800 Weak transcription Duodenum Mucosa Duodenum
38 chr11:47121400-47129000 Weak transcription Hela-S3 cervix

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Last update: Aug 31, 2015