Variant report

Variant	rs4623320
Chromosome Location	chr7:39428542-39428543
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10227915	0.81[CHB][hapmap];0.88[ASN][1000 genomes]
rs10258232	0.82[JPT][hapmap];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12672997	0.81[JPT][hapmap]
rs13438025	0.89[ASN][1000 genomes]
rs2237408	0.87[ASN][1000 genomes]
rs3800853	0.81[JPT][hapmap]
rs4540309	0.81[CHB][hapmap]
rs61105243	0.88[ASN][1000 genomes]
rs6462913	0.80[CHB][hapmap]
rs6462914	0.81[CHB][hapmap]
rs7807957	0.81[CHB][hapmap];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021180	chr7:39424988-39642261	Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:39426000-39432800	Weak transcription	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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