Variant report

Variant	rs4634853
Chromosome Location	chr1:73438848-73438849
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs12404235	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1012319	chr1:73337418-73547086	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:73425000-73443000	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr1:73426600-73443000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr1:73429400-73445400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr1:73434600-73445000	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr1:73435200-73441800	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr1:73438000-73442800	Weak transcription	ES-I3 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links