Variant report
Variant | rs4647139 |
---|---|
Chromosome Location | chr5:60171907-60171908 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr5:60168971..60171964-chr5:60184118..60186790,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10062465 | 0.86[ASN][1000 genomes] |
rs10064187 | 0.94[ASN][1000 genomes] |
rs10076937 | 0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1020371 | 0.94[ASN][1000 genomes] |
rs1038144 | 0.94[ASN][1000 genomes] |
rs10471502 | 0.86[ASN][1000 genomes] |
rs11744756 | 0.94[ASN][1000 genomes] |
rs11957772 | 0.86[ASN][1000 genomes] |
rs12518865 | 0.86[ASN][1000 genomes] |
rs12522154 | 0.81[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs13155076 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs13168191 | 0.86[ASN][1000 genomes] |
rs13359074 | 0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs1382914 | 0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs158564 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs158570 | 0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs158571 | 0.90[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs158696 | 0.80[ASN][1000 genomes] |
rs158697 | 0.80[ASN][1000 genomes] |
rs158699 | 0.80[ASN][1000 genomes] |
rs158700 | 0.80[ASN][1000 genomes] |
rs158914 | 0.89[ASN][1000 genomes] |
rs158915 | 0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs158918 | 0.83[ASN][1000 genomes] |
rs158919 | 0.89[AFR][1000 genomes];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs158921 | 0.82[AFR][1000 genomes];0.82[EUR][1000 genomes] |
rs158922 | 0.89[ASN][1000 genomes] |
rs158923 | 0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs158924 | 0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs158927 | 0.93[AFR][1000 genomes];0.94[ASN][1000 genomes] |
rs158929 | 0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs158931 | 0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs158932 | 0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs158933 | 0.90[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs158934 | 0.90[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs158935 | 0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs158936 | 0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs158937 | 0.83[ASN][1000 genomes] |
rs158938 | 0.89[AFR][1000 genomes];0.89[ASN][1000 genomes] |
rs162228 | 0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs162234 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs162238 | 0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs162241 | 0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs162242 | 0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs162244 | 0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs162247 | 0.80[AFR][1000 genomes];0.87[EUR][1000 genomes] |
rs162248 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs162251 | 0.86[ASN][1000 genomes] |
rs168710 | 0.86[ASN][1000 genomes] |
rs16878547 | 0.80[ASN][1000 genomes] |
rs16878548 | 0.80[ASN][1000 genomes] |
rs169700 | 0.86[AFR][1000 genomes];0.86[ASN][1000 genomes] |
rs172348 | 0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs172945 | 0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs1820082 | 0.83[ASN][1000 genomes] |
rs182410 | 0.91[ASN][1000 genomes] |
rs1867598 | 0.94[ASN][1000 genomes] |
rs187459 | 0.81[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs1989653 | 0.80[ASN][1000 genomes] |
rs2080869 | 0.86[ASN][1000 genomes] |
rs2120954 | 0.89[ASN][1000 genomes] |
rs2120955 | 0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2263514 | 0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs248677 | 0.84[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs248682 | 0.86[ASN][1000 genomes] |
rs248683 | 0.86[ASN][1000 genomes] |
rs248685 | 0.86[ASN][1000 genomes] |
rs248688 | 0.86[ASN][1000 genomes] |
rs2545475 | 0.91[ASN][1000 genomes] |
rs2545478 | 0.86[ASN][1000 genomes] |
rs2590570 | 0.89[ASN][1000 genomes] |
rs2619890 | 0.86[ASN][1000 genomes] |
rs2619893 | 0.86[ASN][1000 genomes] |
rs2650512 | 0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs2650517 | 0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs2694518 | 0.90[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2694528 | 0.80[ASN][1000 genomes] |
rs2694530 | 0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs2694531 | 0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs28407266 | 0.80[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs290503 | 0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs290506 | 0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs290507 | 0.80[AFR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs290509 | 0.82[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs290511 | 0.80[ASN][1000 genomes] |
rs290513 | 0.86[ASN][1000 genomes] |
rs290514 | 0.93[AFR][1000 genomes];0.94[ASN][1000 genomes] |
rs290515 | 0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs290516 | 0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs2950235 | 0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs295531 | 0.91[ASN][1000 genomes] |
rs295533 | 0.86[ASN][1000 genomes] |
rs295551 | 0.91[ASN][1000 genomes] |
rs295559 | 0.91[ASN][1000 genomes] |
rs295560 | 0.91[ASN][1000 genomes] |
rs295561 | 0.91[ASN][1000 genomes] |
rs295563 | 0.91[ASN][1000 genomes] |
rs295564 | 0.91[ASN][1000 genomes] |
rs295566 | 0.89[ASN][1000 genomes] |
rs3101879 | 0.86[ASN][1000 genomes] |
rs3108388 | 0.81[AFR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs3117 | 0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs329622 | 0.84[AFR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs329623 | 0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs329624 | 0.86[ASN][1000 genomes] |
rs329625 | 0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs329626 | 0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs34591 | 0.86[ASN][1000 genomes] |
rs34592 | 0.86[ASN][1000 genomes] |
rs34593 | 0.84[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs34638 | 0.86[ASN][1000 genomes] |
rs34639 | 0.81[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs34643 | 0.86[ASN][1000 genomes] |
rs34644 | 0.81[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs35546392 | 0.97[ASN][1000 genomes] |
rs35617853 | 0.94[ASN][1000 genomes] |
rs35766700 | 1.00[ASN][1000 genomes] |
rs35948426 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs40084 | 0.81[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs40421 | 0.86[ASN][1000 genomes] |
rs4141502 | 0.86[ASN][1000 genomes] |
rs4235483 | 0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4235484 | 0.89[ASN][1000 genomes] |
rs42437 | 0.86[ASN][1000 genomes] |
rs4546327 | 0.94[ASN][1000 genomes] |
rs4647102 | 0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4647138 | 0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4647151 | 0.94[ASN][1000 genomes] |
rs4647162 | 0.93[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs4699963 | 0.94[ASN][1000 genomes] |
rs4700406 | 0.86[ASN][1000 genomes] |
rs56409036 | 0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs59797139 | 0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs6862622 | 0.86[ASN][1000 genomes] |
rs6864355 | 0.88[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs6868884 | 0.86[ASN][1000 genomes] |
rs6869454 | 0.86[ASN][1000 genomes] |
rs6878124 | 0.86[ASN][1000 genomes] |
rs6885989 | 1.00[ASN][1000 genomes] |
rs6886481 | 0.86[ASN][1000 genomes] |
rs723276 | 0.86[ASN][1000 genomes] |
rs9291702 | 0.80[ASN][1000 genomes] |
rs929780 | 0.94[ASN][1000 genomes] |
rs973304 | 0.94[ASN][1000 genomes] |
rs976080 | 0.89[ASN][1000 genomes] |
rs9763418 | 0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs976581 | 0.93[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv492277 | chr5:59905195-60180834 | Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 13 gene(s) | inside rSNPs | diseases |
2 | nsv934153 | chr5:60004982-60309751 | Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 15 gene(s) | inside rSNPs | diseases |
3 | nsv949662 | chr5:60047974-60488379 | Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 42 gene(s) | inside rSNPs | diseases |
4 | nsv1017095 | chr5:60050600-60414783 | Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 19 gene(s) | inside rSNPs | diseases |
5 | nsv933326 | chr5:60074031-60413061 | Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 19 gene(s) | inside rSNPs | diseases |
6 | nsv881712 | chr5:60116613-60266875 | Flanking Active TSS Active TSS Strong transcription Weak transcription Bivalent/Poised TSS ZNF genes & repeats Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
7 | nsv881713 | chr5:60116613-60305125 | Strong transcription Bivalent Enhancer Weak transcription Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
8 | nsv598305 | chr5:60116613-60308836 | Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
9 | nsv881714 | chr5:60116613-60313015 | Bivalent Enhancer Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
10 | nsv881715 | chr5:60116613-60356423 | Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 15 gene(s) | inside rSNPs | diseases |
11 | nsv598306 | chr5:60129361-60266875 | Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Enhancers Bivalent/Poised TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
12 | nsv598307 | chr5:60129361-60308836 | Strong transcription Weak transcription ZNF genes & repeats Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
13 | nsv881716 | chr5:60129361-60313015 | Active TSS ZNF genes & repeats Flanking Active TSS Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
14 | nsv462199 | chr5:60129361-60329624 | Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
15 | nsv598308 | chr5:60129361-60329624 | Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
16 | nsv462200 | chr5:60135985-60266875 | Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
17 | nsv598309 | chr5:60135985-60266875 | Strong transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
18 | nsv598310 | chr5:60135985-60308836 | ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
19 | nsv598311 | chr5:60136626-60308836 | Enhancers Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
20 | nsv520871 | chr5:60141245-60320157 | Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
21 | nsv881717 | chr5:60141245-60372582 | Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 15 gene(s) | inside rSNPs | diseases |
22 | nsv598312 | chr5:60147754-60313015 | Weak transcription Strong transcription Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
23 | nsv881718 | chr5:60147754-60313015 | Weak transcription ZNF genes & repeats Strong transcription Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 14 gene(s) | inside rSNPs | diseases |
24 | esv2762523 | chr5:60166108-60229718 | Strong transcription ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
25 | nsv881719 | chr5:60167888-60241826 | Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
26 | esv1818312 | chr5:60169859-60200993 | Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive region | 4 gene(s) | inside rSNPs | diseases |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:60166600-60177000 | Weak transcription | Ovary | ovary |
2 | chr5:60167200-60192600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
3 | chr5:60167400-60186000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
4 | chr5:60167800-60182000 | Weak transcription | Left Ventricle | heart |
5 | chr5:60167800-60187800 | Weak transcription | Primary T cells from cord blood | blood |
6 | chr5:60167800-60188400 | Weak transcription | Liver | Liver |
7 | chr5:60167800-60192800 | Weak transcription | Primary hematopoietic stem cells | blood |
8 | chr5:60167800-60228200 | Weak transcription | Psoas Muscle | Psoas |
9 | chr5:60168400-60191000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
10 | chr5:60169000-60185800 | Weak transcription | Adipose Nuclei | Adipose |
11 | chr5:60169800-60191000 | Weak transcription | NH-A | brain |