The 2.0 version of rSNPBase

Variant report

Variant rs4653792
Chromosome Location chr1:223917174-223917175
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:223903600-223922400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
2 chr1:223904400-223922400 Genic enhancers NHLF lung
3 chr1:223906600-223921000 Weak transcription Fetal Brain Male brain
4 chr1:223910800-223919800 Genic enhancers Breast Myoepithelial Primary Cells Breast
5 chr1:223911800-223917200 Genic enhancers Muscle Satellite Cultured Cells --
6 chr1:223914400-223917800 Weak transcription Brain Angular Gyrus brain
7 chr1:223914400-223921800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:223914600-223918400 Weak transcription Brain Inferior Temporal Lobe brain
9 chr1:223914800-223919000 Weak transcription Brain Germinal Matrix brain
10 chr1:223915000-223917600 Strong transcription Fetal Intestine Small intestine
11 chr1:223915000-223919800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:223915000-223920800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:223915000-223920800 Weak transcription Liver Liver
14 chr1:223915000-223921000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:223915000-223921000 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr1:223915000-223921000 Genic enhancers NHEK skin
17 chr1:223915200-223918400 Weak transcription Primary B cells from peripheral blood blood
18 chr1:223915200-223918400 Weak transcription Fetal Heart heart
19 chr1:223915200-223918400 Weak transcription Small Intestine intestine
20 chr1:223915200-223918600 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr1:223915200-223919000 Weak transcription Psoas Muscle Psoas
22 chr1:223915200-223930800 Weak transcription Primary T cells from cord blood blood
23 chr1:223915400-223917200 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:223915400-223917800 Weak transcription Fetal Lung lung
25 chr1:223915400-223918000 Weak transcription Brain Hippocampus Middle brain
26 chr1:223915400-223918200 Weak transcription Stomach Mucosa stomach
27 chr1:223915400-223918400 Weak transcription Colon Smooth Muscle Colon
28 chr1:223915400-223927200 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr1:223915400-223933000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr1:223915400-223933000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:223915400-223936200 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr1:223915600-223917800 Weak transcription Fetal Kidney kidney
33 chr1:223915600-223918200 Weak transcription Brain Substantia Nigra brain
34 chr1:223915600-223918400 Weak transcription Primary T helper cells PMA-I stimulated --
35 chr1:223915600-223918400 Weak transcription Brain Cingulate Gyrus brain
36 chr1:223915600-223918400 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr1:223915800-223917200 Strong transcription Primary monocytes fromperipheralblood blood
38 chr1:223915800-223917200 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr1:223915800-223917400 Strong transcription HMEC breast
40 chr1:223915800-223917600 Weak transcription Placenta Placenta
41 chr1:223915800-223917800 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr1:223915800-223918200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
43 chr1:223915800-223918400 Weak transcription Brain Anterior Caudate brain
44 chr1:223915800-223918400 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr1:223915800-223918600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr1:223915800-223918600 Weak transcription Ovary ovary
47 chr1:223915800-223919000 Weak transcription Pancreas Pancrea
48 chr1:223915800-223931600 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr1:223916000-223918600 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr1:223916200-223917800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015