Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10494991	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10494992	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10494993	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10864143	0.92[ASN][1000 genomes]
rs11120462	0.85[ASN][1000 genomes]
rs12041425	0.86[ASN][1000 genomes]
rs12046194	0.91[ASN][1000 genomes]
rs12131054	0.81[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12131478	0.87[ASN][1000 genomes]
rs1377177	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1452607	0.86[ASN][1000 genomes]
rs1452612	0.88[ASN][1000 genomes]
rs17024148	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2123331	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34087768	0.86[ASN][1000 genomes]
rs34443503	0.89[ASN][1000 genomes]
rs4655387	0.92[ASN][1000 genomes]
rs7514693	0.86[ASN][1000 genomes]
rs7535449	0.86[ASN][1000 genomes]
rs7536850	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv468105	chr1:215167236-215248417	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv549182	chr1:215167236-215248417	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215216200-215222000	Weak transcription	Osteobl	bone
2	chr1:215220200-215225400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr1:215220600-215225000	Weak transcription	NHDF-Ad	bronchial
4	chr1:215220800-215221800	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr1:215221200-215227600	Weak transcription	HUES48 Cell Line	embryonic stem cell

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