Variant report

Variant rs4657178
Chromosome Location chr1:162210610-162210611
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:162202600-162222400 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr1:162203000-162218400 Weak transcription iPS-20b Cell Line embryonic stem cell
3 chr1:162205600-162214600 Weak transcription H9 Cell Line embryonic stem cell
4 chr1:162205600-162218400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:162206600-162218400 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr1:162207800-162218800 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:162208200-162218200 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr1:162208800-162211600 Enhancers Cortex derived primary cultured neurospheres brain
9 chr1:162209000-162213000 Enhancers HepG2 liver
10 chr1:162209200-162210800 Enhancers Fetal Intestine Large intestine
11 chr1:162209400-162210800 Enhancers Fetal Intestine Small intestine
12 chr1:162209400-162210800 Enhancers Pancreas Pancrea
13 chr1:162209400-162211000 Enhancers Fetal Muscle Leg muscle
14 chr1:162209400-162211000 Enhancers Gastric stomach
15 chr1:162209600-162211400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:162209600-162211600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:162209800-162210800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:162209800-162211000 Enhancers Lung lung
19 chr1:162209800-162211000 Enhancers Stomach Mucosa stomach
20 chr1:162209800-162211200 Enhancers HMEC breast
21 chr1:162210000-162210800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr1:162210000-162212400 Enhancers Right Atrium heart
23 chr1:162210200-162211000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr1:162210200-162212200 Weak transcription Fetal Muscle Trunk muscle
25 chr1:162210200-162219000 Weak transcription Fetal Lung lung
26 chr1:162210400-162210800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:162210400-162211000 Weak transcription Aorta Aorta
28 chr1:162210600-162216000 Weak transcription Liver Liver

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