The 2.0 version of rSNPBase

Variant report

Variant rs4658300
Chromosome Location chr1:92828539-92828540
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92765800-92850000 Weak transcription Small Intestine intestine
2 chr1:92789800-92830600 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr1:92792600-92846600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:92792800-92850800 Weak transcription Fetal Heart heart
5 chr1:92793800-92830200 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr1:92795200-92830400 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr1:92795200-92846600 Weak transcription Gastric stomach
8 chr1:92795200-92850200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:92795200-92851400 Weak transcription Spleen Spleen
10 chr1:92795600-92831200 Weak transcription NHLF lung
11 chr1:92795800-92834800 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr1:92797800-92830800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr1:92798200-92846800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr1:92799600-92830400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr1:92804400-92846400 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr1:92804400-92853200 Weak transcription NHEK skin
17 chr1:92804600-92830200 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr1:92804600-92833200 Weak transcription NH-A brain
19 chr1:92809000-92832800 Weak transcription Thymus Thymus
20 chr1:92812600-92835600 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr1:92812800-92829600 Weak transcription Right Ventricle heart
22 chr1:92814600-92834200 Weak transcription Hela-S3 cervix
23 chr1:92815000-92853200 Weak transcription Placenta Amnion Placenta Amnion
24 chr1:92815400-92834400 Weak transcription Psoas Muscle Psoas
25 chr1:92816000-92851400 Weak transcription A549 lung
26 chr1:92816400-92846800 Weak transcription Primary monocytes fromperipheralblood blood
27 chr1:92817400-92851400 Weak transcription Rectal Smooth Muscle rectum
28 chr1:92818000-92830400 Weak transcription GM12878-XiMat blood
29 chr1:92818000-92831000 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr1:92818000-92837800 Weak transcription Esophagus oesophagus
31 chr1:92818000-92846200 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr1:92818000-92846400 Weak transcription Brain Angular Gyrus brain
33 chr1:92818000-92851600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr1:92818000-92852600 Weak transcription Colon Smooth Muscle Colon
35 chr1:92818200-92851600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr1:92818600-92828800 Weak transcription Muscle Satellite Cultured Cells --
37 chr1:92818600-92832400 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr1:92818800-92853000 Weak transcription Osteobl bone
39 chr1:92819000-92846400 Weak transcription Brain Hippocampus Middle brain
40 chr1:92819800-92837800 Weak transcription Pancreas Pancrea
41 chr1:92819800-92838000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:92820000-92839600 Weak transcription K562 blood
43 chr1:92823000-92831600 Weak transcription Primary T cells fromperipheralblood blood
44 chr1:92823600-92834800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr1:92823600-92853200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr1:92823800-92846600 Weak transcription Brain Cingulate Gyrus brain
47 chr1:92824000-92846600 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr1:92824000-92846600 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr1:92824000-92851400 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr1:92824400-92846200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015