The 2.0 version of rSNPBase

Variant report

Variant rs4662578
Chromosome Location chr2:128070279-128070280
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128052400-128070400 Weak transcription Esophagus oesophagus
2 chr2:128052400-128070800 Weak transcription Colonic Mucosa Colon
3 chr2:128052400-128071200 Weak transcription Fetal Brain Male brain
4 chr2:128052800-128070800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr2:128052800-128071000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr2:128052800-128071800 Weak transcription NHLF lung
7 chr2:128053000-128070400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr2:128053000-128070800 Weak transcription K562 blood
9 chr2:128053000-128071600 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr2:128058600-128085600 Strong transcription Primary B cells from cord blood blood
11 chr2:128059400-128082800 Strong transcription Liver Liver
12 chr2:128059400-128109600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr2:128059800-128093000 Weak transcription H9 Cell Line embryonic stem cell
14 chr2:128061200-128077600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr2:128061600-128098200 Strong transcription Primary T regulatory cells fromperipheralblood blood
16 chr2:128061800-128096800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr2:128062000-128077600 Strong transcription Fetal Intestine Large intestine
18 chr2:128062000-128077800 Strong transcription Fetal Adrenal Gland Adrenal Gland
19 chr2:128062000-128083200 Strong transcription Primary T cells from cord blood blood
20 chr2:128062000-128085000 Strong transcription Duodenum Mucosa Duodenum
21 chr2:128062000-128086600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr2:128062400-128070800 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr2:128062400-128094000 Strong transcription Rectal Mucosa Donor 29 rectum
24 chr2:128062600-128071800 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr2:128062600-128077600 Strong transcription Breast Myoepithelial Primary Cells Breast
26 chr2:128062600-128077800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr2:128062600-128077800 Strong transcription Dnd41 blood
28 chr2:128062600-128078000 Strong transcription Fetal Thymus thymus
29 chr2:128062600-128083400 Strong transcription Fetal Muscle Trunk muscle
30 chr2:128062600-128083400 Strong transcription Thymus Thymus
31 chr2:128062600-128089400 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr2:128062800-128077800 Strong transcription Primary T cells fromperipheralblood blood
33 chr2:128062800-128098000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
34 chr2:128063000-128076200 Strong transcription Brain Anterior Caudate brain
35 chr2:128063000-128076800 Strong transcription Osteobl bone
36 chr2:128063000-128077400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr2:128063000-128078400 Strong transcription Adipose Nuclei Adipose
38 chr2:128063000-128080200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr2:128063000-128089200 Strong transcription Skeletal Muscle Female skeletal muscle
40 chr2:128063200-128076600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr2:128063200-128080200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr2:128063400-128077800 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr2:128063400-128077800 Strong transcription Fetal Lung lung
44 chr2:128063400-128084800 Strong transcription Primary T helper cells PMA-I stimulated --
45 chr2:128063400-128098400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr2:128063600-128078000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr2:128063600-128081200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr2:128063600-128083400 Strong transcription Primary T helper naive cells fromperipheralblood blood
49 chr2:128063600-128091800 Strong transcription Placenta Placenta
50 chr2:128063800-128072400 Strong transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015