Variant report

Variant	rs4670667
Chromosome Location	chr2:37392402-37392403
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
ENSG00000218739	Chromatin interaction
ENSG00000055332	Chromatin interaction
ENSG00000138068	Chromatin interaction
ENSG00000224891	Chromatin interaction

Extended variants
information (count: 17 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10173858	0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10181241	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10184179	0.81[JPT][hapmap]
rs10204828	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10205833	0.91[CEU][hapmap];0.88[JPT][hapmap]
rs10432634	0.83[CEU][hapmap];0.83[JPT][hapmap]
rs10865122	0.91[CEU][hapmap];0.81[JPT][hapmap]
rs11124565	0.91[CEU][hapmap];0.88[JPT][hapmap]
rs11895771	0.83[CEU][hapmap];0.81[JPT][hapmap]
rs28428996	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3891003	0.87[JPT][hapmap]
rs4374352	0.91[CEU][hapmap];0.83[JPT][hapmap];0.86[TSI][hapmap]
rs4670668	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6728951	0.83[CEU][hapmap];0.81[JPT][hapmap]
rs6734946	0.85[AFR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6742281	0.91[CEU][hapmap];0.81[JPT][hapmap]
rs876462	0.87[JPT][hapmap]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4670667	CEBPZ	cis	lymphoblastoid	seeQTL

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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