Variant report

Variant	rs4670724
Chromosome Location	chr2:37748807-37748808
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs13002383	0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34369565	0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35745581	0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35990829	0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4233923	0.98[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4404250	0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs67348553	0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72795708	0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833814	chr2:37643132-37840247	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv456374	chr2:37669487-37868214	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv470453	chr2:37669487-37868214	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv581473	chr2:37669487-37868214	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37743200-37749000	Weak transcription	Fetal Heart	heart
2	chr2:37744600-37751200	Weak transcription	Psoas Muscle	Psoas
3	chr2:37748600-37749800	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr2:37748600-37750800	Enhancers	Monocytes-CD14+_RO01746	blood
5	chr2:37748800-37749800	Enhancers	Adipose Nuclei	Adipose

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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