Variant report

Variant rs4680
Chromosome Location chr22:19951271-19951272
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:19931400-19954200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr22:19931400-19955200 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr22:19931800-19956800 Weak transcription Small Intestine intestine
4 chr22:19945000-19958400 Strong transcription Primary hematopoietic stem cells short term culture blood
5 chr22:19946400-19951800 Enhancers Placenta Amnion Placenta Amnion
6 chr22:19946400-19952400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr22:19946800-19951600 Weak transcription Aorta Aorta
8 chr22:19947000-19951400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr22:19947600-19951600 Weak transcription Fetal Brain Male brain
10 chr22:19947800-19951400 Weak transcription A549 lung
11 chr22:19947800-19956000 Weak transcription Primary B cells from cord blood blood
12 chr22:19948000-19951400 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr22:19948000-19954400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr22:19948200-19951600 Genic enhancers Fetal Adrenal Gland Adrenal Gland
15 chr22:19948200-19954200 Strong transcription Spleen Spleen
16 chr22:19948200-19957800 Strong transcription Primary monocytes fromperipheralblood blood
17 chr22:19948200-19958200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr22:19948200-19959000 Strong transcription Dnd41 blood
19 chr22:19948400-19951600 Weak transcription Fetal Kidney kidney
20 chr22:19948400-19951600 Genic enhancers Fetal Muscle Leg muscle
21 chr22:19948400-19953400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr22:19948400-19957200 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr22:19948400-19967800 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr22:19948800-19957600 Weak transcription Right Atrium heart
25 chr22:19949000-19952800 Strong transcription Fetal Brain Female brain
26 chr22:19949200-19951400 Weak transcription Primary T cells from cord blood blood
27 chr22:19949400-19957800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr22:19949600-19951400 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
29 chr22:19949600-19952000 Enhancers H1 Cell Line embryonic stem cell
30 chr22:19949600-19952200 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
31 chr22:19949600-19954400 Genic enhancers Brain Germinal Matrix brain
32 chr22:19949600-19962000 Weak transcription GM12878-XiMat blood
33 chr22:19949800-19951400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
34 chr22:19949800-19951400 Flanking Active TSS Duodenum Mucosa Duodenum
35 chr22:19949800-19951400 Enhancers NH-A brain
36 chr22:19950000-19951400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
37 chr22:19950000-19951400 Flanking Active TSS NHEK skin
38 chr22:19950000-19952000 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
39 chr22:19950200-19958200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr22:19950400-19952800 Strong transcription Ovary ovary
41 chr22:19950400-19958000 Strong transcription Adipose Nuclei Adipose
42 chr22:19950400-19958200 Weak transcription H9 Cell Line embryonic stem cell
43 chr22:19950400-19958200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr22:19950400-19958600 Strong transcription Thymus Thymus
45 chr22:19950600-19951400 Enhancers Stomach Mucosa stomach
46 chr22:19950600-19951600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr22:19950600-19951600 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr22:19950600-19952000 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr22:19950600-19952000 Strong transcription Primary T cells fromperipheralblood blood
50 chr22:19950600-19952800 Strong transcription Primary neutrophils fromperipheralblood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links