The 2.0 version of rSNPBase

Variant report

Variant rs4690777
Chromosome Location chr4:144109535-144109536
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144104400-144109800 Active TSS K562 blood
2 chr4:144104600-144109600 Active TSS iPS-20b Cell Line embryonic stem cell
3 chr4:144104800-144109600 Active TSS HUES6 Cell Line embryonic stem cell
4 chr4:144104800-144109600 Active TSS Fetal Intestine Large intestine
5 chr4:144104800-144110800 Active TSS Right Ventricle heart
6 chr4:144104800-144111000 Active TSS NHLF lung
7 chr4:144105000-144109800 Active TSS NHDF-Ad bronchial
8 chr4:144105000-144110000 Active TSS Colonic Mucosa Colon
9 chr4:144105000-144110400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
10 chr4:144105000-144110400 Active TSS Fetal Intestine Small intestine
11 chr4:144105000-144110400 Active TSS Right Atrium heart
12 chr4:144105000-144111000 Active TSS GM12878-XiMat blood
13 chr4:144105200-144109600 Active TSS A549 lung
14 chr4:144105200-144109800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
15 chr4:144105200-144109800 Active TSS Aorta Aorta
16 chr4:144105200-144110000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
17 chr4:144105400-144109600 Active TSS Breast Myoepithelial Primary Cells Breast
18 chr4:144105400-144109800 Active TSS Thymus Thymus
19 chr4:144105400-144109800 Active TSS HSMMtube muscle
20 chr4:144105400-144110800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
21 chr4:144105600-144109600 Active TSS NH-A brain
22 chr4:144106200-144110200 Flanking Active TSS Primary hematopoietic stem cells blood
23 chr4:144106200-144111000 Flanking Active TSS Primary B cells from cord blood blood
24 chr4:144106600-144109600 Flanking Active TSS Adipose Nuclei Adipose
25 chr4:144106600-144110000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr4:144106600-144110200 Flanking Active TSS Primary T cells from cord blood blood
27 chr4:144106600-144110400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr4:144106600-144110400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
29 chr4:144106600-144110400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
30 chr4:144106800-144109800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
31 chr4:144106800-144109800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr4:144107200-144109800 Active TSS Primary T helper 17 cells PMA-I stimulated --
33 chr4:144107200-144110000 Active TSS Primary T cells fromperipheralblood blood
34 chr4:144107200-144110000 Active TSS Stomach Smooth Muscle stomach
35 chr4:144107200-144117600 Weak transcription Spleen Spleen
36 chr4:144107400-144109800 Active TSS Fetal Thymus thymus
37 chr4:144107400-144113800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr4:144107400-144117200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr4:144107400-144137200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr4:144107600-144111400 Active TSS Skeletal Muscle Male skeletal muscle
41 chr4:144108000-144109600 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
42 chr4:144108000-144109600 Active TSS Primary mononuclear cells fromperipheralblood Blood
43 chr4:144108000-144117200 Weak transcription Gastric stomach
44 chr4:144108200-144109600 Weak transcription Stomach Mucosa stomach
45 chr4:144108200-144110400 Enhancers Primary neutrophils fromperipheralblood blood
46 chr4:144108200-144111400 Weak transcription Fetal Muscle Trunk muscle
47 chr4:144108200-144111800 Weak transcription Small Intestine intestine
48 chr4:144108200-144113400 Weak transcription Lung lung
49 chr4:144108200-144113800 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr4:144108200-144116800 Weak transcription Left Ventricle heart

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015