Variant report

Variant rs4702149
Chromosome Location chr5:16504763-16504764
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:16495800-16509000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr5:16496200-16509000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr5:16497000-16505800 Weak transcription Duodenum Mucosa Duodenum
4 chr5:16497000-16506200 Weak transcription Thymus Thymus
5 chr5:16497200-16506800 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr5:16498800-16505400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr5:16500600-16507400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr5:16500800-16505200 Weak transcription Fetal Muscle Leg muscle
9 chr5:16501200-16509000 Weak transcription Primary T helper naive cells fromperipheralblood blood
10 chr5:16502400-16508800 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr5:16503200-16505600 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr5:16503200-16505800 Weak transcription Gastric stomach
13 chr5:16503200-16507400 Weak transcription Brain Cingulate Gyrus brain
14 chr5:16503200-16507600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr5:16503400-16505000 Enhancers Hela-S3 cervix
16 chr5:16503400-16505400 Weak transcription Fetal Heart heart
17 chr5:16503400-16507400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr5:16503400-16507600 Weak transcription NHEK skin
19 chr5:16503400-16508000 Weak transcription Brain Inferior Temporal Lobe brain
20 chr5:16503400-16508600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr5:16503400-16508800 Weak transcription Brain Substantia Nigra brain
22 chr5:16503800-16507800 Weak transcription Osteobl bone
23 chr5:16503800-16509200 Weak transcription Brain Anterior Caudate brain
24 chr5:16504000-16504800 Enhancers Psoas Muscle Psoas
25 chr5:16504000-16505600 Transcr. at gene 5' and 3' Skeletal Muscle Female skeletal muscle
26 chr5:16504000-16506800 Strong transcription Primary T cells from cord blood blood
27 chr5:16504000-16507600 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr5:16504000-16509400 Weak transcription Stomach Mucosa stomach
29 chr5:16504400-16505000 Strong transcription Rectal Mucosa Donor 29 rectum
30 chr5:16504400-16506200 Transcr. at gene 5' and 3' Skeletal Muscle Male skeletal muscle
31 chr5:16504400-16508600 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr5:16504600-16504800 Flanking Active TSS Pancreas Pancrea
33 chr5:16504600-16505000 Transcr. at gene 5' and 3' Left Ventricle heart
34 chr5:16504600-16505200 Flanking Active TSS Liver Liver
35 chr5:16504600-16505400 Strong transcription Fetal Intestine Small intestine
36 chr5:16504600-16506000 ZNF genes & repeats Fetal Intestine Large intestine
37 chr5:16504600-16506000 Enhancers Right Ventricle heart
38 chr5:16504600-16507400 Weak transcription Colonic Mucosa Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links