Variant report

Variant	rs4712123
Chromosome Location	chr6:56156622-56156623
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11757528	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13202635	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4365929	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4529301	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4715607	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4715609	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7773611	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9349812	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:56156000-56156800	Enhancers	Fetal Stomach	stomach
2	chr6:56156000-56157600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr6:56156000-56157600	Enhancers	Fetal Heart	heart
4	chr6:56156000-56157600	Enhancers	Fetal Muscle Leg	muscle
5	chr6:56156200-56156800	Enhancers	Fetal Muscle Trunk	muscle
6	chr6:56156200-56156800	Enhancers	Osteobl	bone
7	chr6:56156200-56157400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr6:56156400-56156800	Enhancers	Muscle Satellite Cultured Cells	--
9	chr6:56156400-56157200	Weak transcription	Colon Smooth Muscle	Colon
10	chr6:56156600-56157400	Weak transcription	A549	lung
11	chr6:56156600-56158800	Weak transcription	Fetal Lung	lung
12	chr6:56156600-56162000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links