Variant report

Variant	rs4726773
Chromosome Location	chr7:145549570-145549571
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr7:145549363..145550991-chr7:145552735..145554413,2	K562	blood:
2	chr7:145544188..145547713-chr7:145548640..145551255,3	K562	blood:
3	chr7:145544508..145547713-chr7:145548814..145551255,3	K562	blood:

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12703745	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12703746	0.82[ASN][1000 genomes]
rs12703747	0.82[ASN][1000 genomes]
rs12703749	0.82[ASN][1000 genomes]
rs12703752	0.82[EUR][1000 genomes]
rs34797950	0.82[ASN][1000 genomes]
rs34916433	0.82[ASN][1000 genomes]
rs34917064	1.00[AFR][1000 genomes]
rs34965344	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35159841	0.81[EUR][1000 genomes]
rs35724228	0.82[ASN][1000 genomes]
rs35957124	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4355696	0.82[ASN][1000 genomes]
rs4370447	1.00[AFR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4726774	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs62503364	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs62503366	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs62503369	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs62505021	1.00[AFR][1000 genomes]
rs73158558	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754040	chr7:145303352-145698352	Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	esv2755386	chr7:145303352-145698352	Genic enhancers Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv889383	chr7:145396141-145549570	Enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv831182	chr7:145399806-145556489	Enhancers Genic enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv1019118	chr7:145483353-145639795	Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv889384	chr7:145541783-146239545	Genic enhancers Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:145544200-145554600	Strong transcription	K562	blood

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