Variant report

Variant	rs4730007
Chromosome Location	chr7:104048885-104048886
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10228106	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs10249235	0.90[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs10254627	0.95[ASN][1000 genomes]
rs10487203	0.95[ASN][1000 genomes]
rs10953428	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs10953432	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs1123760	1.00[CEU][hapmap]
rs12705208	0.83[CHB][hapmap];0.84[JPT][hapmap]
rs1468143	0.95[CEU][hapmap]
rs1468144	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs17390895	0.93[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.95[ASN][1000 genomes]
rs1989823	0.95[CEU][hapmap];0.94[CHB][hapmap];0.94[JPT][hapmap]
rs2040584	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs2188482	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs2188493	0.89[CHB][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs2188494	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.80[YRI][hapmap]
rs2214086	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs4236567	0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.95[ASN][1000 genomes]
rs4727596	0.90[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap]
rs4727599	0.95[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs4730001	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs4730002	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.93[ASN][1000 genomes]
rs4730006	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs6465985	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs6946555	0.88[ASN][1000 genomes]
rs6951873	0.95[CEU][hapmap];1.00[CHB][hapmap]
rs6952170	0.95[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap]
rs6959400	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs7778325	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]
rs7798273	0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv888925	chr7:104047599-104170560	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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