Variant report

Variant	rs4733712
Chromosome Location	chr8:130564649-130564650
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:130547187..130549889-chr8:130563626..130566277,3	K562	blood:
2	chr8:130555128..130557292-chr8:130562897..130565321,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs7843949	0.86[ASN][1000 genomes]
rs8180895	0.86[JPT][hapmap]
rs9297790	0.87[CEU][hapmap];0.92[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4733712	OC90	cis	cerebellum	SCAN

Chromatin state (count:46 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130556800-130568000	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr8:130557800-130568600	Genic enhancers	K562	blood
3	chr8:130560400-130565400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr8:130560800-130565000	Enhancers	Liver	Liver
5	chr8:130561000-130565400	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr8:130561600-130565400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr8:130561600-130565600	Enhancers	Thymus	Thymus
8	chr8:130561800-130565000	Enhancers	Adipose Nuclei	Adipose
9	chr8:130562400-130569000	Weak transcription	Psoas Muscle	Psoas
10	chr8:130562600-130566200	Weak transcription	Primary hematopoietic stem cells	blood
11	chr8:130563200-130565400	Enhancers	Fetal Heart	heart
12	chr8:130563400-130564800	Enhancers	iPS-20b Cell Line	embryonic stem cell
13	chr8:130563400-130565000	Enhancers	Primary neutrophils fromperipheralblood	blood
14	chr8:130563400-130565200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr8:130563600-130565000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr8:130563600-130565000	Enhancers	Brain Anterior Caudate	brain
17	chr8:130563600-130565000	Enhancers	Fetal Thymus	thymus
18	chr8:130563600-130565400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr8:130563800-130564800	Enhancers	Brain Inferior Temporal Lobe	brain
20	chr8:130563800-130564800	Enhancers	Brain Substantia Nigra	brain
21	chr8:130563800-130564800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
22	chr8:130563800-130565200	Enhancers	ES-I3 Cell Line	embryonic stem cell
23	chr8:130564000-130564800	Enhancers	Brain Hippocampus Middle	brain
24	chr8:130564000-130564800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
25	chr8:130564000-130565000	Enhancers	iPS-18 Cell Line	embryonic stem cell
26	chr8:130564000-130565000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr8:130564000-130565000	Enhancers	Brain Angular Gyrus	brain
28	chr8:130564000-130565200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr8:130564000-130565200	Enhancers	HSMMtube	muscle
30	chr8:130564000-130565400	Flanking Active TSS	GM12878-XiMat	blood
31	chr8:130564000-130565400	Enhancers	NH-A	brain
32	chr8:130564200-130564800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
33	chr8:130564200-130565000	Enhancers	HUES6 Cell Line	embryonic stem cell
34	chr8:130564200-130565000	Enhancers	HUES64 Cell Line	embryonic stem cell
35	chr8:130564400-130564800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
36	chr8:130564400-130564800	Enhancers	Brain Cingulate Gyrus	brain
37	chr8:130564400-130564800	Enhancers	Fetal Muscle Leg	muscle
38	chr8:130564400-130565000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr8:130564400-130565000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
40	chr8:130564400-130565000	Enhancers	Left Ventricle	heart
41	chr8:130564400-130565400	ZNF genes & repeats	Primary B cells from cord blood	blood
42	chr8:130564600-130565000	Enhancers	Skeletal Muscle Male	skeletal muscle
43	chr8:130564600-130565000	Transcr. at gene 5' and 3'	Dnd41	blood
44	chr8:130564600-130565000	Enhancers	Osteobl	bone
45	chr8:130564600-130565600	ZNF genes & repeats	Primary B cells from peripheral blood	blood
46	chr8:130564600-130568600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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