Variant report

Variant	rs4734191
Chromosome Location	chr8:110127361-110127362
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10086023	0.90[ASN][1000 genomes]
rs10098145	0.90[ASN][1000 genomes]
rs11785269	0.91[ASN][1000 genomes]
rs12544462	0.89[ASN][1000 genomes]
rs12679311	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13254233	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13269597	0.90[ASN][1000 genomes]
rs16892486	0.89[ASN][1000 genomes]
rs16892496	0.89[ASN][1000 genomes]
rs34092076	0.88[ASN][1000 genomes]
rs3925087	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4130682	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4236801	0.91[ASN][1000 genomes]
rs4446710	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4464939	0.90[ASN][1000 genomes]
rs4546626	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4734190	0.91[ASN][1000 genomes]
rs4734192	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4735095	0.90[ASN][1000 genomes]
rs4735096	0.90[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs4735097	0.83[ASN][1000 genomes]
rs4735098	0.83[ASN][1000 genomes]
rs5778	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7823804	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7828207	0.91[ASN][1000 genomes]
rs7829544	0.83[ASN][1000 genomes]
rs7832552	0.90[ASN][1000 genomes]
rs7844643	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9297421	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022273	chr8:110026712-110146600	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv539715	chr8:110026712-110146600	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110121400-110144600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:110124400-110130200	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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