Variant report

Variant	rs4738993
Chromosome Location	chr8:63585578-63585579
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:63585003..63587129-chr8:63588724..63590696,2	K562	blood:

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:47)

rs_ID	r²[population]
rs10099741	0.81[ASN][1000 genomes]
rs10104349	0.80[EUR][1000 genomes]
rs10112536	0.88[ASN][1000 genomes]
rs10216664	0.84[ASN][1000 genomes]
rs11988063	0.80[ASN][1000 genomes]
rs13250037	0.82[EUR][1000 genomes]
rs13260720	0.80[EUR][1000 genomes]
rs1351362	0.87[ASN][1000 genomes]
rs1383191	0.86[ASN][1000 genomes]
rs1471517	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1480189	0.88[ASN][1000 genomes]
rs1480190	0.88[ASN][1000 genomes]
rs1545792	0.88[ASN][1000 genomes]
rs1545793	0.88[ASN][1000 genomes]
rs1600546	0.84[ASN][1000 genomes]
rs1600547	0.84[ASN][1000 genomes]
rs16929305	0.84[ASN][1000 genomes]
rs16929353	0.89[ASN][1000 genomes]
rs16929378	0.89[ASN][1000 genomes]
rs1871590	0.84[ASN][1000 genomes]
rs2054531	0.82[ASN][1000 genomes]
rs2086378	0.85[ASN][1000 genomes]
rs2086379	0.88[ASN][1000 genomes]
rs2127579	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2127580	0.84[ASN][1000 genomes]
rs2170123	0.84[ASN][1000 genomes]
rs4357278	0.82[EUR][1000 genomes]
rs4366077	0.89[ASN][1000 genomes]
rs4480117	0.84[ASN][1000 genomes]
rs4501571	0.82[EUR][1000 genomes]
rs4738985	0.84[ASN][1000 genomes]
rs57735770	0.89[ASN][1000 genomes]
rs62509502	0.84[ASN][1000 genomes]
rs6472039	0.88[ASN][1000 genomes]
rs7000475	0.82[EUR][1000 genomes]
rs7003224	0.86[ASN][1000 genomes]
rs7004154	0.84[ASN][1000 genomes]
rs7818033	0.84[ASN][1000 genomes]
rs7818203	0.84[ASN][1000 genomes]
rs7819367	0.89[ASN][1000 genomes]
rs7828272	0.88[ASN][1000 genomes]
rs7834422	0.84[ASN][1000 genomes]
rs7835370	0.84[ASN][1000 genomes]
rs7836079	0.84[ASN][1000 genomes]
rs936613	0.84[ASN][1000 genomes]
rs936615	0.84[ASN][1000 genomes]
rs936617	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018879	chr8:63281724-63937632	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv831340	chr8:63515126-63702660	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv890960	chr8:63516962-63629549	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63572400-63602600	Weak transcription	Cortex derived primary cultured neurospheres	brain

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