Variant report

Variant rs4742217
Chromosome Location chr9:674428-674429
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:653400-698000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:670800-675800 Weak transcription H9 Cell Line embryonic stem cell
3 chr9:670800-675800 Weak transcription Esophagus oesophagus
4 chr9:670800-677200 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr9:670800-677600 Weak transcription Gastric stomach
6 chr9:670800-706800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr9:672000-674600 Enhancers ES-I3 Cell Line embryonic stem cell
8 chr9:672000-674600 Enhancers iPS-15b Cell Line embryonic stem cell
9 chr9:672000-674600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
10 chr9:672000-675000 Enhancers Cortex derived primary cultured neurospheres brain
11 chr9:672000-676600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr9:672000-676800 Enhancers HepG2 liver
13 chr9:672000-677000 Enhancers HMEC breast
14 chr9:672000-677200 Enhancers Brain Hippocampus Middle brain
15 chr9:672200-674600 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr9:672200-676600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr9:672400-674600 Enhancers Brain Substantia Nigra brain
18 chr9:673000-674600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr9:673200-677400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr9:673400-674600 Enhancers HUES48 Cell Line embryonic stem cell
21 chr9:673600-674600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr9:673600-674600 Enhancers Fetal Intestine Small intestine
23 chr9:673600-674600 Enhancers Rectal Smooth Muscle rectum
24 chr9:673600-674800 Enhancers HUES6 Cell Line embryonic stem cell
25 chr9:673600-675000 Enhancers H1 Cell Line embryonic stem cell
26 chr9:673600-677800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr9:673600-677800 Weak transcription Pancreas Pancrea
28 chr9:673800-674600 Enhancers Primary T helper cells fromperipheralblood blood
29 chr9:673800-674800 Enhancers HUES64 Cell Line embryonic stem cell
30 chr9:673800-677600 Enhancers iPS-20b Cell Line embryonic stem cell
31 chr9:674000-674600 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr9:674000-674600 Enhancers A549 lung
33 chr9:674000-675000 Enhancers Dnd41 blood
34 chr9:674000-676400 Weak transcription Pancreatic Islets Pancreatic Islet
35 chr9:674000-677200 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr9:674000-677200 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr9:674000-677600 Weak transcription Right Ventricle heart
38 chr9:674200-674600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr9:674200-674600 Flanking Active TSS Brain Cingulate Gyrus brain
40 chr9:674200-676600 Weak transcription Stomach Mucosa stomach
41 chr9:674200-677200 Weak transcription Right Atrium heart
42 chr9:674200-677200 Weak transcription Stomach Smooth Muscle stomach
43 chr9:674400-675400 Weak transcription iPS-18 Cell Line embryonic stem cell
44 chr9:674400-675400 Weak transcription Brain Anterior Caudate brain
45 chr9:674400-675800 Weak transcription Brain Angular Gyrus brain
46 chr9:674400-675800 Weak transcription Brain Inferior Temporal Lobe brain
47 chr9:674400-676000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr9:674400-676200 Weak transcription Liver Liver
49 chr9:674400-676200 Enhancers NHEK skin
50 chr9:674400-676600 Weak transcription Colon Smooth Muscle Colon

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