Variant report

Variant	rs4745015
Chromosome Location	chr9:71067286-71067287
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10735596	0.86[EUR][1000 genomes]
rs10780922	0.88[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs10780935	0.95[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs1492823	0.86[EUR][1000 genomes]
rs1492824	0.85[EUR][1000 genomes]
rs1602751	0.93[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs1887889	0.84[EUR][1000 genomes]
rs2026033	0.86[EUR][1000 genomes]
rs2026034	0.86[EUR][1000 genomes]
rs2149565	0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7020465	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427847	chr9:70318730-71153527	Weak transcription Bivalent/Poised TSS Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:71051200-71091800	Weak transcription	Psoas Muscle	Psoas
2	chr9:71058200-71068000	Enhancers	Rectal Smooth Muscle	rectum
3	chr9:71062200-71069400	Weak transcription	NHLF	lung
4	chr9:71062200-71075800	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr9:71062400-71072200	Weak transcription	Fetal Heart	heart
6	chr9:71063200-71070800	Weak transcription	Fetal Lung	lung
7	chr9:71065000-71069800	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr9:71065800-71080000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr9:71066400-71067400	Enhancers	Spleen	Spleen
10	chr9:71066600-71067400	Enhancers	Aorta	Aorta
11	chr9:71066600-71067600	Genic enhancers	Colon Smooth Muscle	Colon
12	chr9:71066600-71067800	Enhancers	Left Ventricle	heart
13	chr9:71066600-71067800	Enhancers	Right Atrium	heart
14	chr9:71066600-71067800	Enhancers	Right Ventricle	heart
15	chr9:71066600-71068000	Genic enhancers	Stomach Smooth Muscle	stomach
16	chr9:71067000-71067800	Strong transcription	Fetal Stomach	stomach
17	chr9:71067000-71067800	Enhancers	Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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