Variant report

Variant	rs4768847
Chromosome Location	chr12:50887277-50887278
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 83 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:82)

rs_ID	r²[population]
rs10431486	0.82[EUR][1000 genomes]
rs10459233	0.85[EUR][1000 genomes]
rs10747583	0.92[ASN][1000 genomes]
rs10747585	0.82[EUR][1000 genomes]
rs10783369	0.81[EUR][1000 genomes]
rs10783370	0.82[EUR][1000 genomes]
rs10783371	0.82[EUR][1000 genomes]
rs10783372	0.82[EUR][1000 genomes]
rs10783373	0.81[EUR][1000 genomes]
rs10783374	0.82[EUR][1000 genomes]
rs10783375	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10783378	0.82[EUR][1000 genomes]
rs10876042	0.83[EUR][1000 genomes]
rs10876043	0.84[EUR][1000 genomes]
rs10876045	0.96[ASN][1000 genomes]
rs10876047	0.82[EUR][1000 genomes]
rs10876051	0.81[EUR][1000 genomes]
rs10876052	0.81[EUR][1000 genomes]
rs10876053	0.82[EUR][1000 genomes]
rs10876055	0.91[ASN][1000 genomes]
rs10876056	0.82[EUR][1000 genomes]
rs10876058	0.82[EUR][1000 genomes]
rs10876059	0.92[ASN][1000 genomes]
rs10876060	0.80[EUR][1000 genomes]
rs10876061	0.82[EUR][1000 genomes]
rs10876063	0.82[EUR][1000 genomes]
rs10876065	0.82[EUR][1000 genomes]
rs10876066	0.89[ASN][1000 genomes]
rs11169453	0.98[ASN][1000 genomes]
rs11169470	0.87[ASN][1000 genomes]
rs11169479	0.82[EUR][1000 genomes]
rs11169480	0.82[EUR][1000 genomes]
rs11169481	0.81[EUR][1000 genomes]
rs11169484	0.94[ASN][1000 genomes]
rs11169486	0.92[ASN][1000 genomes]
rs11169487	0.82[EUR][1000 genomes]
rs11169490	0.94[ASN][1000 genomes]
rs11169492	0.92[ASN][1000 genomes]
rs11169493	0.81[EUR][1000 genomes]
rs11169500	0.83[EUR][1000 genomes]
rs11613488	0.82[EUR][1000 genomes]
rs12307178	0.86[ASN][1000 genomes]
rs12372538	0.94[ASN][1000 genomes]
rs12425362	0.89[ASN][1000 genomes]
rs12582683	0.84[ASN][1000 genomes]
rs12582712	0.82[EUR][1000 genomes]
rs12814717	0.92[ASN][1000 genomes]
rs12825915	0.98[ASN][1000 genomes]
rs2090851	0.82[EUR][1000 genomes]
rs2243571	0.84[EUR][1000 genomes]
rs2684908	0.82[EUR][1000 genomes]
rs2700478	0.85[EUR][1000 genomes]
rs34867510	0.84[EUR][1000 genomes]
rs3893353	0.82[EUR][1000 genomes]
rs3935138	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3935870	0.92[ASN][1000 genomes]
rs4131769	0.82[EUR][1000 genomes]
rs4516034	0.82[EUR][1000 genomes]
rs4617661	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4768850	0.82[EUR][1000 genomes]
rs4768852	0.81[EUR][1000 genomes]
rs4768853	0.82[EUR][1000 genomes]
rs4768884	0.82[EUR][1000 genomes]
rs4768888	0.82[EUR][1000 genomes]
rs4768889	0.82[EUR][1000 genomes]
rs4768892	0.82[EUR][1000 genomes]
rs4768893	0.82[EUR][1000 genomes]
rs4768895	0.82[EUR][1000 genomes]
rs55680342	0.80[EUR][1000 genomes]
rs55877451	0.81[EUR][1000 genomes]
rs61699126	0.94[ASN][1000 genomes]
rs6580756	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6580761	0.80[EUR][1000 genomes]
rs67092086	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7133687	0.86[ASN][1000 genomes]
rs7138604	0.82[EUR][1000 genomes]
rs7305375	0.86[EUR][1000 genomes]
rs7316864	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7397999	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7487429	0.94[ASN][1000 genomes]
rs7956591	0.82[EUR][1000 genomes]
rs876080	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1820967	chr12:50856613-51002088	Flanking Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:50887000-50888000	Enhancers	Liver	Liver

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