Variant report

Variant rs4802949
Chromosome Location chr19:52960827-52960828
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52954000-52961600 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
2 chr19:52954400-52961400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
3 chr19:52954400-52962600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
4 chr19:52955800-52961400 ZNF genes & repeats Fetal Intestine Small intestine
5 chr19:52956000-52969600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr19:52956000-52986200 ZNF genes & repeats Liver Liver
7 chr19:52956200-52961400 ZNF genes & repeats Primary B cells from peripheral blood blood
8 chr19:52956200-52961400 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
9 chr19:52956200-52961600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
10 chr19:52956200-52962800 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
11 chr19:52956400-52961200 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
12 chr19:52956400-52961400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
13 chr19:52956400-52961400 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
14 chr19:52956400-52961400 ZNF genes & repeats Duodenum Mucosa Duodenum
15 chr19:52956400-52961600 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
16 chr19:52956400-52963800 ZNF genes & repeats Primary B cells from cord blood blood
17 chr19:52956800-52961000 ZNF genes & repeats H1 Cell Line embryonic stem cell
18 chr19:52956800-52961200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
19 chr19:52956800-52961400 ZNF genes & repeats Spleen Spleen
20 chr19:52957200-52961600 ZNF genes & repeats Primary T cells from cord blood blood
21 chr19:52957400-52964600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr19:52957400-52970200 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain
23 chr19:52957600-52961200 ZNF genes & repeats Fetal Kidney kidney
24 chr19:52957600-52962600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr19:52957600-52964800 ZNF genes & repeats Fetal Lung lung
26 chr19:52957600-52967200 ZNF genes & repeats Adipose Nuclei Adipose
27 chr19:52957600-52967400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr19:52957800-52961200 ZNF genes & repeats Fetal Brain Male brain
29 chr19:52957800-52961400 ZNF genes & repeats Fetal Muscle Leg muscle
30 chr19:52957800-52962800 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr19:52957800-52964000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
32 chr19:52957800-52967000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr19:52957800-52968800 ZNF genes & repeats Brain Germinal Matrix brain
34 chr19:52957800-52969600 ZNF genes & repeats Fetal Brain Female brain
35 chr19:52957800-52970000 ZNF genes & repeats Brain Anterior Caudate brain
36 chr19:52957800-52990400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
37 chr19:52958000-52961600 ZNF genes & repeats Primary hematopoietic stem cells blood
38 chr19:52958200-52961400 ZNF genes & repeats Fetal Stomach stomach
39 chr19:52958200-52961400 ZNF genes & repeats Rectal Smooth Muscle rectum
40 chr19:52958400-52961400 ZNF genes & repeats Aorta Aorta
41 chr19:52958400-52962600 Weak transcription Fetal Heart heart
42 chr19:52958800-52961400 ZNF genes & repeats Left Ventricle heart
43 chr19:52958800-52961600 ZNF genes & repeats Brain Cingulate Gyrus brain
44 chr19:52959000-52961200 ZNF genes & repeats Primary T killer naive cells fromperipheralblood blood
45 chr19:52959000-52961400 ZNF genes & repeats Fetal Muscle Trunk muscle
46 chr19:52959000-52961400 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
47 chr19:52959000-52961600 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
48 chr19:52959000-52961600 ZNF genes & repeats Brain Dorsolateral Prefrontal Cortex brain
49 chr19:52959000-52961800 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
50 chr19:52959200-52961000 Strong transcription HSMMtube muscle

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