The 2.0 version of rSNPBase

Variant report

Variant rs4847378
Chromosome Location chr1:93324634-93324635
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:93304400-93349000 Weak transcription Aorta Aorta
2 chr1:93306800-93324800 Weak transcription Pancreas Pancrea
3 chr1:93307000-93324800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:93309400-93324800 Weak transcription NHDF-Ad bronchial
5 chr1:93309600-93324800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:93309800-93342400 Weak transcription NHLF lung
7 chr1:93310000-93324800 Weak transcription HSMMtube muscle
8 chr1:93310400-93324800 Weak transcription Left Ventricle heart
9 chr1:93314400-93338000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:93316000-93342800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr1:93316200-93324800 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr1:93316200-93338200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:93316200-93338400 Weak transcription Fetal Stomach stomach
14 chr1:93318600-93338200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr1:93319400-93327800 Weak transcription Primary B cells from cord blood blood
16 chr1:93320400-93329400 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr1:93320400-93342000 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr1:93320600-93329400 Weak transcription Primary monocytes fromperipheralblood blood
19 chr1:93323200-93325000 Enhancers Fetal Intestine Large intestine
20 chr1:93323200-93325200 Enhancers Liver Liver
21 chr1:93324200-93324800 Enhancers GM12878-XiMat blood
22 chr1:93324200-93325000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
23 chr1:93324200-93325000 Active TSS Rectal Smooth Muscle rectum
24 chr1:93324200-93325000 Enhancers Small Intestine intestine
25 chr1:93324200-93325400 Enhancers Primary T helper 17 cells PMA-I stimulated --
26 chr1:93324200-93325400 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr1:93324200-93325400 Enhancers Fetal Thymus thymus
28 chr1:93324200-93325400 Flanking Active TSS Dnd41 blood
29 chr1:93324200-93325600 Enhancers Primary T cells fromperipheralblood blood
30 chr1:93324200-93325600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
31 chr1:93324400-93324800 Active TSS Primary T helper naive cells fromperipheralblood blood
32 chr1:93324400-93324800 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:93324400-93324800 Active TSS Rectal Mucosa Donor 31 rectum
34 chr1:93324400-93325000 Flanking Active TSS Primary T cells from cord blood blood
35 chr1:93324400-93325200 Enhancers Primary B cells from peripheral blood blood
36 chr1:93324400-93325200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:93324400-93325200 Enhancers A549 lung
38 chr1:93324400-93325200 Active TSS Osteobl bone
39 chr1:93324400-93325800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
40 chr1:93324400-93338200 Weak transcription Fetal Intestine Small intestine
41 chr1:93324600-93324800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr1:93324600-93324800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:93324600-93324800 Active TSS Adipose Nuclei Adipose
44 chr1:93324600-93324800 Active TSS Fetal Adrenal Gland Adrenal Gland
45 chr1:93324600-93324800 Active TSS Fetal Muscle Leg muscle
46 chr1:93324600-93324800 Active TSS Psoas Muscle Psoas
47 chr1:93324600-93324800 Active TSS Skeletal Muscle Male skeletal muscle
48 chr1:93324600-93324800 Weak transcription HSMM muscle
49 chr1:93324600-93325000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr1:93324600-93325000 Enhancers Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015