Variant report

Variant	rs4892408
Chromosome Location	chrX:74661427-74661428
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11796028	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap]
rs11796750	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12832571	0.83[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.88[MEX][hapmap];1.00[MKK][hapmap];0.93[YRI][hapmap]
rs12839727	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs1936915	0.86[CEU][hapmap];0.87[CHB][hapmap]
rs1936917	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2012661	0.87[CHB][hapmap]
rs2124691	0.87[CHB][hapmap]
rs2124693	0.86[CEU][hapmap];0.87[CHB][hapmap]
rs2367174	0.87[CHB][hapmap]
rs2886845	0.81[GIH][hapmap];0.82[MEX][hapmap]
rs2886929	0.86[CEU][hapmap];0.87[CHB][hapmap]
rs4892580	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap]
rs5937369	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap]
rs5937384	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs5938060	1.00[CHB][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap]
rs5938075	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap]
rs5938116	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5981832	0.93[YRI][hapmap]
rs5981861	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap]
rs5981875	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap]
rs5981886	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap]
rs6607563	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6647139	0.87[CHB][hapmap];0.82[MEX][hapmap]
rs6647730	0.84[CHB][hapmap]
rs6647731	0.86[CEU][hapmap];0.87[CHB][hapmap];0.82[MEX][hapmap]
rs6647753	0.87[CHB][hapmap]
rs7052314	0.91[ASW][hapmap];0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap]
rs7878508	0.86[CEU][hapmap];0.87[CHB][hapmap];0.82[MEX][hapmap]
rs9887743	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:74660800-74661800	Weak transcription	Fetal Lung	lung
2	chrX:74661000-74664800	Weak transcription	Ovary	ovary
3	chrX:74661000-74666800	Weak transcription	Aorta	Aorta

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